Best Alignments for T0423

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2otmA	1.9777e-22	2otmA/T0423-2otmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1x25A	5.4174e-19	1x25A/T0423-1x25A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
2uykA	1.0672e-18	2uykA/T0423-2uykA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1jd1A	1.9193e-18	1jd1A/T0423-1jd1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
2b33A	2.6057e-18	2b33A/T0423-2b33A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
1qahA	3.6702e-18	1qahA/T0423-1qahA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
2cvlA	4.0886e-18	2cvlA/T0423-2cvlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
1qu9A	1.1533e-17	1qu9A/T0423-1qu9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
1oniA	1.2209e-17	1oniA/T0423-1oniA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
1qd9A	1.2786e-17	1qd9A/T0423-1qd9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
1pf5A	3.2890e-16	1pf5A/T0423-1pf5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
2ewcA	3.8243e-15	2ewcA/T0423-2ewcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
2ig8A	2.0507e-14	2ig8A/T0423-2ig8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1eejA	3.4072e+01	1eejA/T0423-1eejA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.47.1.9 d.17.3.1
2ox1A	3.7789e+01	2ox1A/T0423-2ox1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1dbfA	3.8159e+01	1dbfA/T0423-1dbfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.2
2a2lA	4.1164e+01	2a2lA/T0423-2a2lA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.110.9.1
2btuA	4.4922e+01	2btuA/T0423-2btuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qfeA	4.5975e+01	1qfeA/T0423-1qfeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vs1A	4.5975e+01	1vs1A/T0423-1vs1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001