# List of top-scoring protein chains for T0423.t2k-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2dyyA	126	3.23e-15		
1xrgA	156	1.45e-14	d.79.1.1	115868
2b33A	140	8.77e-14	d.79.1.1	127765
1qd9A	124	1.61e-13	d.79.1.1	39758
2cwjA	123	4.14e-13	d.79.1.1	130924
1x25A	128	5.49e-13	d.79.1.1	121619
2cvlA	124	6.76e-13	d.79.1.1	130871
1qu9A	128	1.37e-12	d.79.1.1	39755
1oniA	138	1.55e-12	d.79.1.1	87144
1qahA	136	1.74e-12	d.79.1.1	96338
1j7hA	130	1.81e-12	d.79.1.1	77097
1nq3A	136	2.56e-12	d.79.1.1	92039
1jd1A	129	2.68e-12	d.79.1.1	62890
2uykA	129	3.05e-12		
2otmA	154	5.83e-11		
1pf5A	131	0.000260	d.79.1.1	94604
2ig8A	144	0.000933		
2ewcA	126	1.028	d.79.1.1	132454
2v7bA	529	3.260		
2npsD	82	41.54		
2p7nA	407	45.28		
1thtA	305	52.69	c.69.1.13	34711
1r29A	127	55.93	d.42.1.1	96856
2ffjA	300	66.62	e.50.1.1	133387
1y0bA	197	82.90	c.61.1.1	122476
2fxvA	194	83.13	c.61.1.1	134342