Best Alignments for T0423

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2otmA	1.7765e-23	2otmA/T0423-2otmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1x25A	1.1387e-21	1x25A/T0423-1x25A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
1qahA	1.1508e-21	1qahA/T0423-1qahA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
1pf5A	1.2307e-21	1pf5A/T0423-1pf5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
1jd1A	1.5542e-21	1jd1A/T0423-1jd1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
1qd9A	2.3382e-21	1qd9A/T0423-1qd9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
2uykA	2.7975e-21	2uykA/T0423-2uykA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qu9A	5.2156e-21	1qu9A/T0423-1qu9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
2cvlA	5.7390e-21	2cvlA/T0423-2cvlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
2ig8A	1.0199e-20	2ig8A/T0423-2ig8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ewcA	1.9723e-17	2ewcA/T0423-2ewcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
1zc6A	1.4797e+01	1zc6A/T0423-1zc6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.5 c.55.1.5
1p9eA	2.9329e+01	1p9eA/T0423-1p9eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.157.1.5
2gmnA	3.0356e+01	2gmnA/T0423-2gmnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2r7hA	4.8453e+01	2r7hA/T0423-2r7hA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2p3rA	4.9276e+01	2p3rA/T0423-2p3rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.4 c.55.1.4
8abpA	4.9649e+01	8abpA/T0423-8abpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.93.1.1
3bxpA	4.9793e+01	3bxpA/T0423-3bxpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2aioA	5.2506e+01	2aioA/T0423-2aioA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.157.1.1
1qxyA	5.3825e+01	1qxyA/T0423-1qxyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.127.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001