# List of top-scoring protein chains for T0423.t06-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2dyyA	126	3.51e-20		
1xrgA	156	1.73e-18	d.79.1.1	115868
2b33A	140	3.58e-18	d.79.1.1	127765
1qd9A	124	1.02e-17	d.79.1.1	39758
1oniA	138	8.10e-17	d.79.1.1	87144
2cvlA	124	8.68e-17	d.79.1.1	130871
1nq3A	136	9.46e-17	d.79.1.1	92039
1qahA	136	9.47e-17	d.79.1.1	96338
1x25A	128	1.04e-16	d.79.1.1	121619
1j7hA	130	1.19e-16	d.79.1.1	77097
1qu9A	128	2.06e-16	d.79.1.1	39755
2cwjA	123	6.89e-16	d.79.1.1	130924
2uykA	129	1.56e-15		
1jd1A	129	1.58e-15	d.79.1.1	62890
1pf5A	131	1.91e-11	d.79.1.1	94604
2otmA	154	1.38e-09		
2ig8A	144	1.10e-08		
2ewcA	126	0.003474	d.79.1.1	132454
2v7bA	529	0.5311		
1if0A	256	33.80	i.14.1.1	62335
2fs3A	282	34.66		
1ohgA	282	34.84	d.183.1.1	93018
2gp1A	282	35.81		
2owrA	218	53.79		
1zupA	315	54.64	c.55.3.11	125681
2jx0A	135	56.23		
2owqA	238	56.31		
1qh5A	260	57.87	d.157.1.2	42057
1yc61	154	67.53		
2f46A	156	70.36		
1mjhA	162	82.47	c.26.2.4	31639