Best Alignments for T0423

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2otmA	2.5921e-23	2otmA/T0423-2otmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2b33A	1.7570e-21	2b33A/T0423-2b33A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
1qu9A	1.9154e-21	1qu9A/T0423-1qu9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
2cvlA	2.2365e-21	2cvlA/T0423-2cvlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
1jd1A	2.3132e-21	1jd1A/T0423-1jd1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
1qahA	2.6360e-21	1qahA/T0423-1qahA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
1oniA	3.2847e-21	1oniA/T0423-1oniA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
1qd9A	3.7273e-21	1qd9A/T0423-1qd9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
1x25A	6.8489e-21	1x25A/T0423-1x25A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
2ig8A	1.0517e-20	2ig8A/T0423-2ig8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2uykA	1.6818e-20	2uykA/T0423-2uykA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pf5A	4.5344e-20	1pf5A/T0423-1pf5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
2ewcA	1.5863e-17	2ewcA/T0423-2ewcA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
1zl0A	2.2465e+01	1zl0A/T0423-1zl0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.8.10.1 c.23.16.7
2ch5A	2.2492e+01	2ch5A/T0423-2ch5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.5 c.55.1.5
1zc6A	2.2701e+01	1zc6A/T0423-1zc6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.5 c.55.1.5
1glcG	2.9954e+01	1glcG/T0423-1glcG-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.4 c.55.1.4
1zrsA	3.1058e+01	1zrsA/T0423-1zrsA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.8.10.1 c.23.16.7
1zcoA	3.3237e+01	1zcoA/T0423-1zcoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1sfjA	4.0313e+01	1sfjA/T0423-1sfjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001