# List of top-scoring protein chains for T0423.t04-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2dyyA	126	2.49e-20		
2b33A	140	1.57e-18	d.79.1.1	127765
1xrgA	156	2.28e-18	d.79.1.1	115868
1qd9A	124	7.50e-18	d.79.1.1	39758
1oniA	138	2.62e-17	d.79.1.1	87144
1qahA	136	3.52e-17	d.79.1.1	96338
1nq3A	136	4.07e-17	d.79.1.1	92039
1j7hA	130	6.73e-17	d.79.1.1	77097
1x25A	128	7.28e-17	d.79.1.1	121619
2cvlA	124	8.83e-17	d.79.1.1	130871
1qu9A	128	9.84e-17	d.79.1.1	39755
2cwjA	123	7.57e-16	d.79.1.1	130924
2uykA	129	8.37e-16		
1jd1A	129	1.18e-15	d.79.1.1	62890
1pf5A	131	8.77e-12	d.79.1.1	94604
2otmA	154	8.83e-10		
2ig8A	144	5.20e-09		
2ewcA	126	0.002756	d.79.1.1	132454
2v7bA	529	2.458		
1zupA	315	47.71	c.55.3.11	125681
2f46A	156	49.69		
2jx0A	135	59.20		
1z69A	327	72.67		
1flgA	582	73.48	b.70.1.1	27682
1v7zA	260	74.64	c.125.1.1	100488
1mjhA	162	76.92	c.26.2.4	31639
1qh5A	260	82.63	d.157.1.2	42057
2v7fA	150	84.49