Best Alignments for T0422

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1w5tA	1.1196e-12	1w5tA/T0422-1w5tA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.11 c.37.1.20
1lv7A	5.3199e-12	1lv7A/T0422-1lv7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.20
1fnnA	7.9449e-12	1fnnA/T0422-1fnnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.11 c.37.1.20
3b9pA	1.1225e-11	3b9pA/T0422-3b9pA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2c9oA	1.5934e-11	2c9oA/T0422-2c9oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1sxjA	2.3965e-11	1sxjA/T0422-1sxjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.80.1.1 c.37.1.20
1d2nA	2.7160e-11	1d2nA/T0422-1d2nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.20
1sxjC	3.1988e-11	1sxjC/T0422-1sxjC-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.80.1.1 c.37.1.20
1in4A	3.6493e-11	1in4A/T0422-1in4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.11 c.37.1.20
1g41A	6.4765e-11	1g41A/T0422-1g41A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.20
1in6A	4.3868e-10	1in6A/T0422-1in6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.11 c.37.1.20
1lw7A	4.8143e-10	1lw7A/T0422-1lw7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.26.1.3 c.37.1.1
3bosA	7.1365e-10	3bosA/T0422-3bosA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2r44A	7.7440e-10	2r44A/T0422-2r44A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1a5t	1.7898e-09	1a5t/T0422-1a5t-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2chgA	2.1245e-09	2chgA/T0422-2chgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1njgA	3.4066e-09	1njgA/T0422-1njgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.20
1gvnB	3.9377e-09	1gvnB/T0422-1gvnB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.21
1sxjE	4.2773e-09	1sxjE/T0422-1sxjE-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.80.1.1 c.37.1.20
1u0jA	1.8706e-08	1u0jA/T0422-1u0jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.20

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001