Best Alignments for T0422

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1lv7A/T0422-1lv7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1lv7A/T0422-1lv7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3082e-441.04e-161 c.37.1.20
3b9pA/T0422-3b9pA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3b9pA/T0422-3b9pA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1647e-431.38e-160
1e32A/T0422-1e32A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1e32A/T0422-1e32A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0900e-411.96e-162 1e32A b.52.2.3
c.37.1.20
d.31.1.1
1xwiA/T0422-1xwiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xwiA/T0422-1xwiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6894e-415.36e-155
2dhrA/T0422-2dhrA-t04-global-adpstyle1.a2m 2dhrA/T0422-2dhrA-t04-global-adpstyle1.al 9.6966e-212.94e-111
3cf2A/T0422-3cf2A-t04-global-adpstyle1.a2m 3cf2A/T0422-3cf2A-t04-global-adpstyle1.al 2.3585e-205.73e-107
3cf0A/T0422-3cf0A-t04-global-adpstyle1.a2m 3cf0A/T0422-3cf0A-t04-global-adpstyle1.al 2.3085e-192.94e-111
2rkoA/T0422-2rkoA-t04-global-adpstyle1.a2m 2rkoA/T0422-2rkoA-t04-global-adpstyle1.al 6.1677e-181.61e-107
2qp9X/T0422-2qp9X-t04-global-adpstyle1.a2m 2qp9X/T0422-2qp9X-t04-global-adpstyle1.al 8.0817e-184.63e-107
2qz4A/T0422-2qz4A-t04-global-adpstyle1.a2m 2qz4A/T0422-2qz4A-t04-global-adpstyle1.al 2.6112e-175.72e-98

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001