Best Alignments for T0419

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2z0hA	3.7211e-03	2z0hA/T0419-2z0hA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pbrA	2.0766e-02	2pbrA/T0419-2pbrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ccjA	3.1807e-02	2ccjA/T0419-2ccjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1nn5A	7.3079e-02	1nn5A/T0419-1nn5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
1gtvA	1.0879e-01	1gtvA/T0419-1gtvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
2axpA	1.2964e-01	2axpA/T0419-2axpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
2plrA	1.5713e-01	2plrA/T0419-2plrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2p5tB	1.5876e-01	2p5tB/T0419-2p5tB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ukz	1.8204e-01	1ukz/T0419-1ukz-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1e9eA	2.4760e-01	1e9eA/T0419-1e9eA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
2vp4A	4.4113e-01	2vp4A/T0419-2vp4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qf9A	5.0161e-01	1qf9A/T0419-1qf9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
2c95A	5.3088e-01	2c95A/T0419-2c95A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3tmkA	6.0043e-01	3tmkA/T0419-3tmkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
1rz3A	6.0308e-01	1rz3A/T0419-1rz3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.6
1oe0A	7.3590e-01	1oe0A/T0419-1oe0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
4tmkA	7.3781e-01	4tmkA/T0419-4tmkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
5tmpA	8.0522e-01	5tmpA/T0419-5tmpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
1e4yA	8.7055e-01	1e4yA/T0419-1e4yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1 g.41.2.1
1zm7A	9.3492e-01	1zm7A/T0419-1zm7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001