Best Alignments for T0419

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2pbrA	8.8655e-03	2pbrA/T0419-2pbrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1p5zB	1.5221e-02	1p5zB/T0419-1p5zB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
1khtA	2.1417e-01	1khtA/T0419-1khtA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
2ccjA	2.3344e-01	2ccjA/T0419-2ccjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2z0hA	3.7463e-01	2z0hA/T0419-2z0hA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ki9A	4.2317e-01	1ki9A/T0419-1ki9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
1gtvA	1.0032e+00	1gtvA/T0419-1gtvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
1in6A	1.3515e+00	1in6A/T0419-1in6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.11 c.37.1.20
4tmkA	1.5580e+00	4tmkA/T0419-4tmkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
1ukzA	2.8778e+00	1ukzA/T0419-1ukzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
2rhmA	3.0623e+00	2rhmA/T0419-2rhmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1in4A	3.1724e+00	1in4A/T0419-1in4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.11 c.37.1.20
1zm7A	3.4047e+00	1zm7A/T0419-1zm7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gvnB	3.5068e+00	1gvnB/T0419-1gvnB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.21
2vp4A	4.0396e+00	2vp4A/T0419-2vp4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2plrA	4.2419e+00	2plrA/T0419-2plrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qf9A	4.3672e+00	1qf9A/T0419-1qf9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
1rz3A	4.6227e+00	1rz3A/T0419-1rz3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.6
1e4yA	5.0911e+00	1e4yA/T0419-1e4yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1 g.41.2.1
1xjcA	5.0988e+00	1xjcA/T0419-1xjcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.10

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001