Best Alignments for T0419

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1p5zB	3.7363e-06	1p5zB/T0419-1p5zB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
1gtvA	1.2846e-01	1gtvA/T0419-1gtvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
2pbrA	2.1059e-01	2pbrA/T0419-2pbrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2plrA	2.6238e-01	2plrA/T0419-2plrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ccjA	3.1664e-01	2ccjA/T0419-2ccjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ukzA	3.6108e-01	1ukzA/T0419-1ukzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
4tmkA	3.6429e-01	4tmkA/T0419-4tmkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
1qf9A	3.7676e-01	1qf9A/T0419-1qf9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
2z0hA	4.1426e-01	2z0hA/T0419-2z0hA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1z6gA	5.1943e-01	1z6gA/T0419-1z6gA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ak2A	6.6211e-01	1ak2A/T0419-1ak2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1 g.41.2.1
1ki9A	9.2412e-01	1ki9A/T0419-1ki9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
2qorA	1.2630e+00	2qorA/T0419-2qorA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qt1A	1.3179e+00	2qt1A/T0419-2qt1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ga8A	1.3836e+00	2ga8A/T0419-2ga8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ax4A	1.4683e+00	2ax4A/T0419-2ax4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2bwjA	1.5149e+00	2bwjA/T0419-2bwjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1knqA	1.5213e+00	1knqA/T0419-1knqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.17
1ukz	1.6182e+00	1ukz/T0419-1ukz-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3be4A	1.6977e+00	3be4A/T0419-3be4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001