Best Alignments for T0419

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2plrA	3.0159e-10	2plrA/T0419-2plrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pbrA	4.8090e-10	2pbrA/T0419-2pbrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1p5zB	8.1183e-10	1p5zB/T0419-1p5zB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
2qorA	2.2273e-09	2qorA/T0419-2qorA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ccjA	7.8494e-09	2ccjA/T0419-2ccjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ukzA	2.4888e-08	1ukzA/T0419-1ukzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
1gtvA	2.5691e-08	1gtvA/T0419-1gtvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
2z0hA	3.5295e-08	2z0hA/T0419-2z0hA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
4tmkA	4.4397e-08	4tmkA/T0419-4tmkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
2bwjA	6.6395e-08	2bwjA/T0419-2bwjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1z6gA	6.9952e-08	1z6gA/T0419-1z6gA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1z8fA	7.8666e-08	1z8fA/T0419-1z8fA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ex7A	1.6953e-07	1ex7A/T0419-1ex7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
1p6xA	1.9027e-07	1p6xA/T0419-1p6xA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
2vp4A	2.0610e-07	2vp4A/T0419-2vp4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1oe0A	3.6224e-07	1oe0A/T0419-1oe0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
1zm7A	3.6532e-07	1zm7A/T0419-1zm7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2j41A	3.9354e-07	2j41A/T0419-2j41A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1s4qA	4.0185e-07	1s4qA/T0419-1s4qA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1
1e2kA	4.8727e-07	1e2kA/T0419-1e2kA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001