Best Alignments for T0418

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2hszA/T0418-2hszA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2hszA/T0418-2hszA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1199e-251.94e-138 c.108.1.6
2pibA/T0418-2pibA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2pibA/T0418-2pibA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6402e-242.15e-130
2nyvA/T0418-2nyvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2nyvA/T0418-2nyvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4916e-244.95e-116
2hi0A/T0418-2hi0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2hi0A/T0418-2hi0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.3102e-241.69e-125
2hoqA/T0418-2hoqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2hoqA/T0418-2hoqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4988e-217.56e-115
2qltA/T0418-2qltA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2qltA/T0418-2qltA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.4785e-192.84e-88
1x42A/T0418-1x42A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x42A/T0418-1x42A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7311e-181.74e-92 c.108.1.1
1swvA/T0418-1swvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1swvA/T0418-1swvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.4416e-182.34e-88 c.108.1.3
2no4A/T0418-2no4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2no4A/T0418-2no4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2582e-175.78e-93
2om6A/T0418-2om6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2om6A/T0418-2om6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5096e-163.75e-86

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001