Best Alignments for T0417

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1wwzA	1.1969e-14	1wwzA/T0417-1wwzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
1mk4A	1.2565e-14	1mk4A/T0417-1mk4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
1yvoA	1.6812e-14	1yvoA/T0417-1yvoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
2i6cA	3.2744e-14	2i6cA/T0417-2i6cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
2j8mA	3.5375e-14	2j8mA/T0417-2j8mA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ge3A	3.9757e-14	2ge3A/T0417-2ge3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
1u6mA	4.9127e-14	1u6mA/T0417-1u6mA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
1yr0A	4.9441e-14	1yr0A/T0417-1yr0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
2i79A	5.5768e-14	2i79A/T0417-2i79A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2fiaA	6.7508e-14	2fiaA/T0417-2fiaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
2c27A	8.7714e-14	2c27A/T0417-2c27A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
1qsmA	1.6425e-13	1qsmA/T0417-1qsmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
1z4eA	1.8161e-13	1z4eA/T0417-1z4eA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
3c26A	2.5739e-13	3c26A/T0417-3c26A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1xebA	2.6472e-13	1xebA/T0417-1xebA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
1s3zA	2.6672e-13	1s3zA/T0417-1s3zA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
2euiA	3.7254e-13	2euiA/T0417-2euiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
2b5gA	3.8318e-13	2b5gA/T0417-2b5gA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
1vhsA	4.1410e-13	1vhsA/T0417-1vhsA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
1i12A	5.2484e-13	1i12A/T0417-1i12A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001