Best Alignments for T0417

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1yreA	6.6030e-20	1yreA/T0417-1yreA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
1yk3A	4.5413e-19	1yk3A/T0417-1yk3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
2qmlA	7.3247e-19	2qmlA/T0417-2qmlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2z10A	1.0198e-18	2z10A/T0417-2z10A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2fsrA	1.1092e-18	2fsrA/T0417-2fsrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
1vhsA	1.6415e-18	1vhsA/T0417-1vhsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
1sqhA	1.6676e-18	1sqhA/T0417-1sqhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.5
2oh1A	1.9824e-18	2oh1A/T0417-2oh1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2fckA	2.3446e-18	2fckA/T0417-2fckA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
3c26A	3.0656e-18	3c26A/T0417-3c26A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hv2A	4.4341e-18	2hv2A/T0417-2hv2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1nslA	5.6452e-18	1nslA/T0417-1nslA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
2cy2A	5.7748e-18	2cy2A/T0417-2cy2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
2ge3A	8.9651e-18	2ge3A/T0417-2ge3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
1s7kA	9.6495e-18	1s7kA/T0417-1s7kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
1qsmA	1.5987e-17	1qsmA/T0417-1qsmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
2prbA	1.7906e-17	2prbA/T0417-2prbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2r1iA	1.8050e-17	2r1iA/T0417-2r1iA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ob0A	3.3171e-17	2ob0A/T0417-2ob0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yvoA	3.3974e-17	1yvoA/T0417-1yvoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001