Best Alignments for T0417

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2j8mA	5.1853e-21	2j8mA/T0417-2j8mA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ae6A	7.6750e-21	2ae6A/T0417-2ae6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
2ge3A	3.8434e-20	2ge3A/T0417-2ge3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
2b5gA	5.7183e-20	2b5gA/T0417-2b5gA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
2o28A	8.2321e-20	2o28A/T0417-2o28A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3c26A	1.5857e-19	3c26A/T0417-3c26A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2reeA	1.9329e-19	2reeA/T0417-2reeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yr0A	2.4479e-19	1yr0A/T0417-1yr0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
2cy2A	2.8107e-19	2cy2A/T0417-2cy2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
2ob0A	2.8744e-19	2ob0A/T0417-2ob0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2r7hA	3.9805e-19	2r7hA/T0417-2r7hA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1tiqA	5.7029e-19	1tiqA/T0417-1tiqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
1kuxA	8.2167e-19	1kuxA/T0417-1kuxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
1yreA	8.8531e-19	1yreA/T0417-1yreA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
1yvoA	9.5638e-19	1yvoA/T0417-1yvoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
2i6cA	1.0379e-18	2i6cA/T0417-2i6cA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
1nslA	1.0528e-18	1nslA/T0417-1nslA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
2c27A	1.0708e-18	2c27A/T0417-2c27A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
1l0cA	1.1735e-18	1l0cA/T0417-1l0cA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.108.1.1
2cntA	1.4347e-18	2cntA/T0417-2cntA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001