# List of top-scoring protein chains for t06-w0.5-1-near-backbone-11-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
3bs1A	103	1.21e-11		
2vh1A	220	9.96		
2yzsA	315	12.25		
1g6eA	87	13.79	b.11.1.6	60317
1k82A	268	17.00	a.156.1.2,b.113.1.1,g.39.1.8	75866,75867,75868
1in4A	334	18.83	a.4.5.11,c.37.1.20	62597,62598
1c8cA	64	22.16	b.34.13.1	59084
1gg3A	279	23.55	a.11.2.1,b.55.1.5,d.15.1.4	16372,27007,37615
8abp	306	23.92		
2e5yA	133	24.88		
2uubP	88	25.56	d.27.1.1	139947
2z2iA	191	25.93		
2qe7H	135	28.84		
1vetB	125	38.46	d.110.7.1	108554
2fvyA	309	38.82	c.93.1.1	134227
1g61A	228	46.63	d.126.1.1	41126
1fjgP	88	48.45	d.27.1.1	38444
1dfuP	94	50.36	b.53.1.1	26936
1sg5A	86	51.95	b.137.1.2	118960
1zcbA	362	61.34	a.66.1.1,c.37.1.8	124901,124902
2h29A	189	62.05		
2ozhA	142	62.57		
1twdA	256	63.82	c.1.30.1	107397
2vqeP	88	65.27		
1tif	78	65.37		
1tifA	78	68.12	d.15.8.1	37836
2ja9A	175	69.20		
1q2hA	69	69.36	a.34.4.1	104498
1rsgA	516	71.39		
3b79A	129	74.92		
1i4nA	251	75.54	c.1.2.4	71114
2paqA	201	77.48	a.211.1.1	139643
2pthA	193	82.13	c.56.3.1	33793
2bbhA	269	84.35	d.328.1.1	128266
2ioyA	283	85.60		
2j3mA	572	88.47		
1xyiA	66	89.74