Best Alignments for T0415

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
3bs1A	4.0237e-15	3bs1A/T0415-3bs1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2yzsA	9.8643e+00	2yzsA/T0415-2yzsA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2auwA	2.1355e+01	2auwA/T0415-2auwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.35.1.10 d.331.1.1
1k82A	2.7785e+01	1k82A/T0415-1k82A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.156.1.2 b.113.1.1 g.39.1.8
1azpA	3.4519e+01	1azpA/T0415-1azpA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.13.1
1c8cA	4.2572e+01	1c8cA/T0415-1c8cA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.13.1
1ynfA	4.8708e+01	1ynfA/T0415-1ynfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.126.1.7
1j7xA	5.3986e+01	1j7xA/T0415-1j7xA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1q1oA	5.4283e+01	1q1oA/T0415-1q1oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1avyA	5.7147e+01	1avyA/T0415-1avyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1szqA	6.3615e+01	1szqA/T0415-1szqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2z2iA	6.5580e+01	2z2iA/T0415-2z2iA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2yqcA	6.6825e+01	2yqcA/T0415-2yqcA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1a0pA	6.7558e+01	1a0pA/T0415-1a0pA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.60.9.1 d.163.1.1
2bgzA	6.8078e+01	2bgzA/T0415-2bgzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1mixA	6.8617e+01	1mixA/T0415-1mixA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.11.2.1 b.55.1.5
1yx1A	6.9748e+01	1yx1A/T0415-1yx1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.15.7
1l1zA	7.0317e+01	1l1zA/T0415-1l1zA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.156.1.2 b.113.1.1 g.39.1.8
1wmmA	7.0380e+01	1wmmA/T0415-1wmmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.122.1.8
1xyiA	7.0547e+01	1xyiA/T0415-1xyiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001