Best Alignments for T0413

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1l7aA	3.2829e-25	1l7aA/T0413-1l7aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.25
2hu5A	5.5873e-25	2hu5A/T0413-2hu5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.69.7.2 c.69.1.33
2z3zA	1.1546e-23	2z3zA/T0413-2z3zA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1u4nA	3.9076e-23	1u4nA/T0413-1u4nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.2
1lzlA	3.9113e-23	1lzlA/T0413-1lzlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.2
2b20A	8.1433e-23	2b20A/T0413-2b20A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.18.20 c.69.1.2
1k8qA	1.5952e-22	1k8qA/T0413-1k8qA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.6
2d5lA	1.9585e-22	2d5lA/T0413-2d5lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2uz0A	2.0678e-22	2uz0A/T0413-2uz0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wb4A	2.2706e-22	1wb4A/T0413-1wb4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.2
2b61A	3.1906e-22	2b61A/T0413-2b61A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1f0nA	4.3161e-22	1f0nA/T0413-1f0nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.3
2pl5A	5.6144e-22	2pl5A/T0413-2pl5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2jbwA	6.4051e-22	2jbwA/T0413-2jbwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2o7rA	8.4409e-22	2o7rA/T0413-2o7rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qm0A	1.1066e-21	2qm0A/T0413-2qm0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1jfrA	1.4401e-21	1jfrA/T0413-1jfrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.16
1hlgA	2.3406e-21	1hlgA/T0413-1hlgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.6
2gzsA	2.3515e-21	2gzsA/T0413-2gzsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1lnsA	2.4021e-21	1lnsA/T0413-1lnsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.40.2.1 b.18.1.13 c.69.1.21

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001