Best Alignments for T0413

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2d5lA/T0413-2d5lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d5lA/T0413-2d5lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5065e-203.06e-116
2z3zA/T0413-2z3zA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2z3zA/T0413-2z3zA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.3574e-203.76e-115
1orvA/T0413-1orvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1orvA/T0413-1orvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.7509e-203.44e-109 b.70.3.1
c.69.1.24
2hu5A/T0413-2hu5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2hu5A/T0413-2hu5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.8213e-199.00e-104 b.69.7.2
c.69.1.33
1pv1A/T0413-1pv1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pv1A/T0413-1pv1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.4086e-188.51e-90 c.69.1.34
1jjfA/T0413-1jjfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jjfA/T0413-1jjfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.2041e-174.41e-92 c.69.1.2
2uz0A/T0413-2uz0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2uz0A/T0413-2uz0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.5771e-164.53e-85
1c7jA/T0413-1c7jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1c7jA/T0413-1c7jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7613e-153.49e-54 2bce c.69.1.1
1a8uA/T0413-1a8uA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1a8uA/T0413-1a8uA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8501e-157.88e-69 1brt c.69.1.12
1c7iA/T0413-1c7iA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1c7iA/T0413-1c7iA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8773e-151.77e-53 1thg c.69.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001