Best Alignments for T0413

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2hu5A	8.6974e-24	2hu5A/T0413-2hu5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.69.7.2 c.69.1.33
2d5lA	5.8425e-23	2d5lA/T0413-2d5lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2z3zA	7.4441e-23	2z3zA/T0413-2z3zA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1l7aA	5.2157e-22	1l7aA/T0413-1l7aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.25
2b20A	1.0096e-20	2b20A/T0413-2b20A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.18.20 c.69.1.2
1orvA	1.0345e-20	1orvA/T0413-1orvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.70.3.1 c.69.1.24
1lzlA	1.0459e-20	1lzlA/T0413-1lzlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.2
2uz0A	1.3471e-20	2uz0A/T0413-2uz0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2jbwA	2.1081e-20	2jbwA/T0413-2jbwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wb4A	3.3970e-20	1wb4A/T0413-1wb4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.2
1u4nA	3.5710e-20	1u4nA/T0413-1u4nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.2
1jjfA	4.1724e-20	1jjfA/T0413-1jjfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.2
1jfrA	5.7856e-20	1jfrA/T0413-1jfrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.16
3b5eA	6.5785e-20	3b5eA/T0413-3b5eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qm0A	1.0306e-19	2qm0A/T0413-2qm0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pv1A	1.3413e-19	1pv1A/T0413-1pv1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.34
1f0nA	1.7540e-19	1f0nA/T0413-1f0nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.3
2r8bA	1.9841e-19	2r8bA/T0413-2r8bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3c8dA	2.1784e-19	3c8dA/T0413-3c8dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yr2A	2.5981e-19	1yr2A/T0413-1yr2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001