Best Alignments for T0413

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2jbwA	2.6069e-14	2jbwA/T0413-2jbwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2d5lA	1.1029e-12	2d5lA/T0413-2d5lA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1jjfA	2.6736e-12	1jjfA/T0413-1jjfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.2
1l7aA	5.4260e-12	1l7aA/T0413-1l7aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.25
2z3zA	5.9612e-12	2z3zA/T0413-2z3zA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ufoA	6.3669e-12	1ufoA/T0413-1ufoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.27
1fj2A	6.5965e-12	1fj2A/T0413-1fj2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.14
1lzlA	6.9040e-12	1lzlA/T0413-1lzlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.2
2hm7A	7.3902e-12	2hm7A/T0413-2hm7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1auoA	1.2779e-11	1auoA/T0413-1auoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.14
2o2gA	1.3081e-11	2o2gA/T0413-2o2gA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2i3dA	3.2580e-11	2i3dA/T0413-2i3dA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1r88A	3.4003e-11	1r88A/T0413-1r88A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.3
1u4nA	3.6736e-11	1u4nA/T0413-1u4nA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.2
2hdwA	3.7586e-11	2hdwA/T0413-2hdwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2uz0A	4.1528e-11	2uz0A/T0413-2uz0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2rauA	4.2477e-11	2rauA/T0413-2rauA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1jfrA	4.5162e-11	1jfrA/T0413-1jfrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.16
1orvA	4.7450e-11	1orvA/T0413-1orvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.70.3.1 c.69.1.24
1c4xA	5.3366e-11	1c4xA/T0413-1c4xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.10

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001