Best Alignments for T0413

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1l7aA	5.1095e-27	1l7aA/T0413-1l7aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.25
2hu5A	1.6989e-26	2hu5A/T0413-2hu5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.69.7.2 c.69.1.33
2z3zA	1.7317e-25	2z3zA/T0413-2z3zA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1lzlA	5.8006e-25	1lzlA/T0413-1lzlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.2
2d5lA	1.7785e-24	2d5lA/T0413-2d5lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1u4nA	5.3188e-24	1u4nA/T0413-1u4nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.2
1lnsA	2.7488e-23	1lnsA/T0413-1lnsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.40.2.1 b.18.1.13 c.69.1.21
1wb4A	3.9824e-23	1wb4A/T0413-1wb4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.2
2uz0A	4.2734e-23	2uz0A/T0413-2uz0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2b20A	4.9128e-23	2b20A/T0413-2b20A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.18.20 c.69.1.2
2jbwA	5.1517e-23	2jbwA/T0413-2jbwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1jfrA	5.6366e-23	1jfrA/T0413-1jfrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.16
2o7rA	6.2036e-23	2o7rA/T0413-2o7rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1k8qA	7.2281e-23	1k8qA/T0413-1k8qA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.6
2b61A	9.8225e-23	2b61A/T0413-2b61A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2fx5A	1.2389e-22	2fx5A/T0413-2fx5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pl5A	1.4188e-22	2pl5A/T0413-2pl5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1f0nA	2.1316e-22	1f0nA/T0413-1f0nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.3
2hdwA	2.4777e-22	2hdwA/T0413-2hdwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qlwA	2.9625e-22	1qlwA/T0413-1qlwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.15

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001