Best Alignments for T0413

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2hu5A	1.1065e-27	2hu5A/T0413-2hu5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.69.7.2 c.69.1.33
2d5lA	9.6062e-27	2d5lA/T0413-2d5lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2z3zA	2.5536e-25	2z3zA/T0413-2z3zA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1orvA	2.7223e-24	1orvA/T0413-1orvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.70.3.1 c.69.1.24
1xfdA	4.1236e-24	1xfdA/T0413-1xfdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.70.3.1 c.69.1.24
1yr2A	1.0564e-23	1yr2A/T0413-1yr2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2b20A	3.9422e-23	2b20A/T0413-2b20A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.18.20 c.69.1.2
3c8dA	6.3562e-23	3c8dA/T0413-3c8dA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3b5eA	9.9353e-23	3b5eA/T0413-3b5eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gzsA	1.3223e-22	2gzsA/T0413-2gzsA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2uz0A	1.9848e-22	2uz0A/T0413-2uz0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pv1A	2.7560e-22	1pv1A/T0413-1pv1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.34
1o6gA	2.9442e-22	1o6gA/T0413-1o6gA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.69.7.1 c.69.1.4
1jjfA	3.0756e-22	1jjfA/T0413-1jjfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.2
1wb4A	5.3131e-22	1wb4A/T0413-1wb4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.2
2qm0A	5.8715e-22	2qm0A/T0413-2qm0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qfmA	1.2666e-21	1qfmA/T0413-1qfmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.69.7.1 c.69.1.4
1h2wA	1.7825e-21	1h2wA/T0413-1h2wA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.69.7.1 c.69.1.4
2r8bA	2.8561e-21	2r8bA/T0413-2r8bA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2bklA	4.0977e-21	2bklA/T0413-2bklA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001