Best Alignments for T0412

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2o99A	3.3899e-23	2o99A/T0412-2o99A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.110.2.2
1tf1A	7.3467e-23	1tf1A/T0412-1tf1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.110.2.2
1ysqA	1.3442e-22	1ysqA/T0412-1ysqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yspA	2.4175e-22	1yspA/T0412-1yspA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bjnA	6.4797e-22	3bjnA/T0412-3bjnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ia2A	6.7195e-22	2ia2A/T0412-2ia2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2g7uA	2.5871e-21	2g7uA/T0412-2g7uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1mkmA	3.7985e-21	1mkmA/T0412-1mkmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.33 d.110.2.2
2o0yA	6.5325e-20	2o0yA/T0412-2o0yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1td5A	6.2131e-12	1td5A/T0412-1td5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.110.2.2
2qq9A	3.3564e-01	2qq9A/T0412-2qq9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2uzhA	1.7770e+01	2uzhA/T0412-2uzhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2basA	1.8311e+01	2basA/T0412-2basA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.33.1 d.110.6.2
1mc0A	2.5397e+01	1mc0A/T0412-1mc0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.110.2.1 d.110.2.1
2uv0E	3.2679e+01	2uv0E/T0412-2uv0E-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gx1A	3.8388e+01	1gx1A/T0412-1gx1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.5.1
1t0aA	3.9099e+01	1t0aA/T0412-1t0aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.5.1
1k6kA	4.0762e+01	1k6kA/T0412-1k6kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.174.1.1
2dtrA	4.0977e+01	2dtrA/T0412-2dtrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2e4sA	4.7957e+01	2e4sA/T0412-2e4sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001