Best Alignments for T0412

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2o99A	1.1209e-22	2o99A/T0412-2o99A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.110.2.2
1td5A	1.1351e-21	1td5A/T0412-1td5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.110.2.2
2ia2A	2.0603e-21	2ia2A/T0412-2ia2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ysqA	2.2997e-21	1ysqA/T0412-1ysqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1tf1A	3.8758e-21	1tf1A/T0412-1tf1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.110.2.2
3bjnA	5.8523e-21	3bjnA/T0412-3bjnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yspA	1.0113e-20	1yspA/T0412-1yspA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1mkmA	1.2655e-20	1mkmA/T0412-1mkmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.33 d.110.2.2
2g7uA	2.8930e-20	2g7uA/T0412-2g7uA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2o0yA	5.5622e-19	2o0yA/T0412-2o0yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qq9A	4.0314e-01	2qq9A/T0412-2qq9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2e4sA	4.4227e+00	2e4sA/T0412-2e4sA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1mc0A	6.3480e+00	1mc0A/T0412-1mc0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.110.2.1 d.110.2.1
2basA	8.9183e+00	2basA/T0412-2basA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.33.1 d.110.6.2
2a2lA	1.6353e+01	2a2lA/T0412-2a2lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.110.9.1
2zmfA	2.0233e+01	2zmfA/T0412-2zmfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dtr	2.2910e+01	2dtr/T0412-2dtr-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dtrA	2.3141e+01	2dtrA/T0412-2dtrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2r6oA	2.4424e+01	2r6oA/T0412-2r6oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2r1iA	2.7752e+01	2r1iA/T0412-2r1iA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001