Best Alignments for T0412

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1mkmA/T0412-1mkmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mkmA/T0412-1mkmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4895e-262.64e-100 a.4.5.33
d.110.2.2
1yspA/T0412-1yspA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yspA/T0412-1yspA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.4706e-264.60e-98
1td5A/T0412-1td5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1td5A/T0412-1td5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3752e-251.76e-95 d.110.2.2
2ia2A/T0412-2ia2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ia2A/T0412-2ia2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6911e-243.76e-99
1ysqA/T0412-1ysqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ysqA/T0412-1ysqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6009e-232.91e-88
2g7uA/T0412-2g7uA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2g7uA/T0412-2g7uA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.0467e-235.98e-89
3bjnA/T0412-3bjnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3bjnA/T0412-3bjnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.3211e-204.02e-73
2o0yA/T0412-2o0yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2o0yA/T0412-2o0yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9158e-191.58e-74
1mc0A/T0412-1mc0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mc0A/T0412-1mc0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.5208e-024.40e-17 d.110.2.1
d.110.2.1
1ykdA/T0412-1ykdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ykdA/T0412-1ykdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0845e-011.86e-17

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001