Best Alignments for T0411

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1rhsA	7.3245e-20	1rhsA/T0411-1rhsA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2
1uarA	3.1138e-17	1uarA/T0411-1uarA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2
1e0cA	4.9846e-17	1e0cA/T0411-1e0cA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2
1okgA	7.6968e-17	1okgA/T0411-1okgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2 d.26.1.3
2hhgA	8.5012e-17	2hhgA/T0411-2hhgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rhs	9.2445e-17	1rhs/T0411-1rhs-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gmxA	2.3771e-16	1gmxA/T0411-1gmxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.3
1c25	5.5063e-16	1c25/T0411-1c25-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qb0A	2.6495e-15	1qb0A/T0411-1qb0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.1
2a2kA	8.3597e-15	2a2kA/T0411-2a2kA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2fsxA	1.8799e-14	2fsxA/T0411-2fsxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1t3kA	2.2108e-14	1t3kA/T0411-1t3kA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.1
1ymkA	6.2607e-14	1ymkA/T0411-1ymkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.1
1yt8A	7.0716e-14	1yt8A/T0411-1yt8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
2j6pA	2.9723e-13	2j6pA/T0411-2j6pA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1whbA	5.1816e-13	1whbA/T0411-1whbA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.4
2gwfA	2.2317e-12	2gwfA/T0411-2gwfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.4
2oucA	4.5401e-12	2oucA/T0411-2oucA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2eg4A	1.7242e-11	2eg4A/T0411-2eg4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wv9A	2.6187e-10	1wv9A/T0411-1wv9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001