Best Alignments for T0411

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1rhsA	3.7953e-17	1rhsA/T0411-1rhsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2
1rhs	1.1490e-16	1rhs/T0411-1rhs-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1e0cA	6.7626e-16	1e0cA/T0411-1e0cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2
2hhgA	1.4924e-15	2hhgA/T0411-2hhgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gmxA	2.5125e-15	1gmxA/T0411-1gmxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.3
1uarA	4.5146e-15	1uarA/T0411-1uarA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2
1yt8A	1.0314e-14	1yt8A/T0411-1yt8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
1t3kA	1.3071e-14	1t3kA/T0411-1t3kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.1
1qb0A	2.7921e-14	1qb0A/T0411-1qb0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.1
2fsxA	3.9403e-14	2fsxA/T0411-2fsxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2a2kA	1.5834e-13	2a2kA/T0411-2a2kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ymkA	2.2406e-13	1ymkA/T0411-1ymkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.1
1okgA	2.6010e-13	1okgA/T0411-1okgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2 d.26.1.3
2j6pA	1.4526e-12	2j6pA/T0411-2j6pA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2eg4A	3.4837e-12	2eg4A/T0411-2eg4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1whbA	1.6557e-11	1whbA/T0411-1whbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.4
2oucA	7.8063e-11	2oucA/T0411-2oucA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gwfA	1.6964e-10	2gwfA/T0411-2gwfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.4
1wv9A	2.5003e-10	1wv9A/T0411-1wv9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1c25	1.3538e-07	1c25/T0411-1c25-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001