Best Alignments for T0411

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1rhs	3.5042e-18	1rhs/T0411-1rhs-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rhsA	2.7293e-16	1rhsA/T0411-1rhsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2
1e0cA	3.5319e-16	1e0cA/T0411-1e0cA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2
1yt8A	1.5874e-15	1yt8A/T0411-1yt8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
2hhgA	3.4022e-15	2hhgA/T0411-2hhgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1t3kA	9.8715e-15	1t3kA/T0411-1t3kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.1
1uarA	1.0171e-14	1uarA/T0411-1uarA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2
1gmxA	1.2178e-14	1gmxA/T0411-1gmxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.3
1qb0A	2.2820e-14	1qb0A/T0411-1qb0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.1
2j6pA	3.4439e-14	2j6pA/T0411-2j6pA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1whbA	6.9971e-14	1whbA/T0411-1whbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.4
2fsxA	8.4660e-14	2fsxA/T0411-2fsxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2a2kA	3.8166e-13	2a2kA/T0411-2a2kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ymkA	3.9791e-13	1ymkA/T0411-1ymkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.1
1okgA	2.8860e-12	1okgA/T0411-1okgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.2 c.46.1.2 d.26.1.3
2eg4A	1.5624e-11	2eg4A/T0411-2eg4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gwfA	2.3359e-11	2gwfA/T0411-2gwfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.46.1.4
2oucA	9.6161e-11	2oucA/T0411-2oucA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wv9A	9.3659e-10	1wv9A/T0411-1wv9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2f46A	2.7010e-01	2f46A/T0411-2f46A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001