PFRMAT RR
TARGET T0406
AUTHOR SAM-T06-server
REMARK From group SAM-TO6 under the direction of
REMARK Kevin Karplus.
REMARK Residue-residue contact predictions
REMARK  by George Shackelford and Kevin Karplus
REMARK The value given is an approximation of the probability
REMARK as provided by the neural network.
REMARK The predictions are limited to a score >= .18 which
REMARK is an approximation of the probability.
REMARK
METHOD The predictor is an artificial neural network.
METHOD NN: logseploglen.5xt04_ent.5xnearNS_str2.miRpz_entR_pplR.n45.net
METHOD Inputs may include separation and sequence length,
METHOD e-value statistic based on mutual information values,
METHOD a statistic based on propensity of residues in contact.
METHOD Other inputs are distributions from alignments and
METHOD secondary predictions from SAM-t04 and/or SAM-t06 of
METHOD the University of California, Santa Cruz
MODEL 1
MYQTIEGFLQSWTYETESTQKMLDVLTDESLSQEIAPGHWTLGRVAWHIV
TAIPVILSGTGLKFEGETKDYPVPTSAKTIADGYRKVNTAFVEALQSEWT
DKDLTTINDFFGRPMPNSIFLMTLINHQNHHRGQMTVLMRQAGLTVPGVY
GPAKEEWATAGMEAPKM
4 42 0 8 0.642685
4 123 0 8 0.61673
4 136 0 8 0.6528
4 137 0 8 0.660281
5 23 0 8 0.591622
5 31 0 8 0.664926
5 40 0 8 0.595173
5 42 0 8 0.73301
5 46 0 8 0.728996
5 49 0 8 0.711999
5 56 0 8 0.67843
5 57 0 8 0.603836
5 58 0 8 0.744522
5 80 0 8 0.608063
5 124 0 8 0.686714
5 130 0 8 0.618592
5 138 0 8 0.69863
7 19 0 8 0.606954
8 19 0 8 0.863015
8 22 0 8 0.834688
8 23 0 8 0.795394
8 26 0 8 0.619235
8 31 0 8 0.727917
8 42 0 8 0.865782
8 43 0 8 0.74957
8 45 0 8 0.87027
8 46 0 8 0.844243
8 48 0 8 0.612301
8 49 0 8 0.844577
8 50 0 8 0.83182
8 51 0 8 0.700946
8 52 0 8 0.863091
8 55 0 8 0.701396
8 56 0 8 0.686565
8 57 0 8 0.767571
8 80 0 8 0.723636
8 84 0 8 0.608215
8 87 0 8 0.631666
8 91 0 8 0.729489
8 94 0 8 0.708659
8 95 0 8 0.729666
8 117 0 8 0.682234
8 120 0 8 0.820879
8 121 0 8 0.799944
8 122 0 8 0.669385
8 123 0 8 0.717524
8 124 0 8 0.819455
8 125 0 8 0.844054
8 126 0 8 0.600803
8 132 0 8 0.689143
8 134 0 8 0.793868
8 135 0 8 0.829314
8 136 0 8 0.670801
8 137 0 8 0.796337
8 138 0 8 0.814397
8 139 0 8 0.839327
8 140 0 8 0.608525
8 142 0 8 0.684149
9 19 0 8 0.814576
9 22 0 8 0.817555
9 23 0 8 0.730264
9 26 0 8 0.674845
9 31 0 8 0.645701
9 42 0 8 0.745505
9 45 0 8 0.736322
9 46 0 8 0.644639
9 47 0 8 0.746761
9 50 0 8 0.685521
9 52 0 8 0.739772
9 55 0 8 0.619347
9 57 0 8 0.608338
9 87 0 8 0.711318
9 91 0 8 0.605642
9 94 0 8 0.621301
9 120 0 8 0.703307
9 121 0 8 0.62768
9 124 0 8 0.689727
9 137 0 8 0.721439
11 20 0 8 0.714133
11 23 0 8 0.616896
11 40 0 8 0.658782
11 42 0 8 0.830942
11 44 0 8 0.755206
11 45 0 8 0.845588
11 46 0 8 0.789092
11 47 0 8 0.762962
11 48 0 8 0.602001
11 49 0 8 0.721838
11 52 0 8 0.796406
11 53 0 8 0.744387
11 55 0 8 0.757922
11 56 0 8 0.766109
11 117 0 8 0.700331
11 122 0 8 0.717237
11 123 0 8 0.77863
11 125 0 8 0.787256
11 126 0 8 0.724241
11 128 0 8 0.702356
11 132 0 8 0.727073
11 134 0 8 0.737114
11 135 0 8 0.76893
11 136 0 8 0.694132
11 138 0 8 0.776952
11 140 0 8 0.69093
12 21 0 8 0.637329
12 22 0 8 0.866354
12 23 0 8 0.856367
12 25 0 8 0.659051
12 26 0 8 0.797416
12 31 0 8 0.812263
12 35 0 8 0.62049
12 39 0 8 0.696316
12 40 0 8 0.775357
12 42 0 8 0.915443
12 43 0 8 0.797364
12 44 0 8 0.748869
12 45 0 8 0.899069
12 46 0 8 0.85234
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12 48 0 8 0.68058
12 49 0 8 0.846006
12 50 0 8 0.881128
12 51 0 8 0.764212
12 52 0 8 0.873631
12 53 0 8 0.839131
12 55 0 8 0.722045
12 56 0 8 0.803315
12 57 0 8 0.766586
12 58 0 8 0.671256
12 60 0 8 0.647553
12 77 0 8 0.725309
12 80 0 8 0.787726
12 84 0 8 0.886126
12 87 0 8 0.777815
12 88 0 8 0.8477
12 91 0 8 0.8478
12 94 0 8 0.812992
12 95 0 8 0.801729
12 110 0 8 0.614566
12 117 0 8 0.711149
12 119 0 8 0.661512
12 120 0 8 0.801401
12 121 0 8 0.810324
12 122 0 8 0.599664
12 123 0 8 0.829209
12 124 0 8 0.870685
12 125 0 8 0.863854
12 126 0 8 0.74419
12 128 0 8 0.741506
12 132 0 8 0.781036
12 134 0 8 0.836585
12 135 0 8 0.849715
12 136 0 8 0.791256
12 137 0 8 0.865568
12 138 0 8 0.845691
12 139 0 8 0.843866
12 140 0 8 0.733488
12 142 0 8 0.815655
14 39 0 8 0.609829
14 45 0 8 0.63396
14 53 0 8 0.620957
14 123 0 8 0.684928
14 132 0 8 0.643735
15 39 0 8 0.663501
15 40 0 8 0.742671
15 42 0 8 0.807949
15 44 0 8 0.758836
15 45 0 8 0.870942
15 46 0 8 0.772192
15 47 0 8 0.832002
15 50 0 8 0.812342
15 52 0 8 0.802875
15 53 0 8 0.76105
15 56 0 8 0.646002
15 80 0 8 0.637802
15 84 0 8 0.712145
15 88 0 8 0.785754
15 91 0 8 0.704703
15 94 0 8 0.744311
15 122 0 8 0.69923
15 123 0 8 0.78894
15 124 0 8 0.758382
15 125 0 8 0.800392
15 126 0 8 0.750445
15 128 0 8 0.799678
15 129 0 8 0.62086
15 130 0 8 0.748345
15 132 0 8 0.774145
15 134 0 8 0.775975
15 135 0 8 0.746988
15 136 0 8 0.763183
15 137 0 8 0.787114
15 138 0 8 0.785958
15 139 0 8 0.777276
15 140 0 8 0.752874
15 141 0 8 0.657679
15 150 0 8 0.683914
16 25 0 8 0.705901
16 26 0 8 0.688506
16 35 0 8 0.609839
16 40 0 8 0.73768
16 42 0 8 0.863308
16 43 0 8 0.7506
16 44 0 8 0.76724
16 45 0 8 0.868855
16 46 0 8 0.768326
16 47 0 8 0.803701
16 49 0 8 0.714636
16 50 0 8 0.816204
16 51 0 8 0.772897
16 52 0 8 0.809221
16 53 0 8 0.809915
16 56 0 8 0.632662
16 77 0 8 0.682478
16 83 0 8 0.811224
16 84 0 8 0.697649
16 87 0 8 0.757304
16 88 0 8 0.697494
16 95 0 8 0.620192
16 119 0 8 0.752535
16 120 0 8 0.790088
16 121 0 8 0.685998
16 122 0 8 0.706801
16 123 0 8 0.77348
16 125 0 8 0.685031
16 126 0 8 0.669802
16 128 0 8 0.802304
16 129 0 8 0.626475
16 130 0 8 0.734554
16 132 0 8 0.764827
16 134 0 8 0.660515
16 135 0 8 0.737707
16 136 0 8 0.720338
16 137 0 8 0.759491
16 138 0 8 0.744687
16 139 0 8 0.727512
16 140 0 8 0.613169
16 142 0 8 0.791325
18 39 0 8 0.603253
18 40 0 8 0.668745
18 42 0 8 0.719633
18 44 0 8 0.739672
18 45 0 8 0.814773
18 46 0 8 0.70502
18 47 0 8 0.628104
18 50 0 8 0.665763
18 51 0 8 0.753775
18 52 0 8 0.685786
18 53 0 8 0.721034
18 94 0 8 0.724412
18 119 0 8 0.695776
18 120 0 8 0.727452
18 123 0 8 0.769488
18 126 0 8 0.679464
18 132 0 8 0.707214
18 136 0 8 0.665097
18 137 0 8 0.765933
18 139 0 8 0.595848
19 31 0 8 0.829352
19 35 0 8 0.665276
19 39 0 8 0.65197
19 40 0 8 0.839152
19 42 0 8 0.854781
19 43 0 8 0.815532
19 44 0 8 0.81201
19 45 0 8 0.901025
19 46 0 8 0.889631
19 47 0 8 0.857671
19 48 0 8 0.658776
19 49 0 8 0.820963
19 50 0 8 0.882516
19 51 0 8 0.828244
19 52 0 8 0.861882
19 53 0 8 0.812205
19 55 0 8 0.822695
19 56 0 8 0.802625
19 57 0 8 0.782625
19 80 0 8 0.821797
19 81 0 8 0.656227
19 84 0 8 0.847589
19 88 0 8 0.800745
19 91 0 8 0.80384
19 94 0 8 0.811825
19 95 0 8 0.788769
19 110 0 8 0.638297
19 117 0 8 0.695512
19 120 0 8 0.824389
19 121 0 8 0.789325
19 123 0 8 0.835294
19 124 0 8 0.84628
19 125 0 8 0.843834
19 126 0 8 0.77902
19 128 0 8 0.834869
19 130 0 8 0.781634
19 132 0 8 0.855221
19 134 0 8 0.755913
19 135 0 8 0.807447
19 136 0 8 0.777319
19 137 0 8 0.855038
19 138 0 8 0.865948
19 139 0 8 0.85205
19 140 0 8 0.720943
19 141 0 8 0.638025
19 142 0 8 0.648122
19 146 0 8 0.631953
19 150 0 8 0.659845
20 44 0 8 0.738196
20 45 0 8 0.752289
20 53 0 8 0.653248
22 31 0 8 0.789541
22 39 0 8 0.598629
22 40 0 8 0.71115
22 42 0 8 0.864281
22 45 0 8 0.872035
22 46 0 8 0.851261
22 47 0 8 0.810883
22 48 0 8 0.63215
22 49 0 8 0.845097
22 50 0 8 0.810476
22 52 0 8 0.799538
22 53 0 8 0.759424
22 55 0 8 0.728182
22 56 0 8 0.633878
22 57 0 8 0.707041
22 77 0 8 0.683115
22 80 0 8 0.700933
22 84 0 8 0.620405
22 87 0 8 0.694095
22 91 0 8 0.692148
22 94 0 8 0.710644
22 117 0 8 0.683177
22 120 0 8 0.713995
22 121 0 8 0.78184
22 122 0 8 0.647472
22 124 0 8 0.830099
22 125 0 8 0.803739
22 126 0 8 0.687381
22 127 0 8 0.744135
22 128 0 8 0.659624
22 130 0 8 0.714616
22 132 0 8 0.785512
22 134 0 8 0.773693
22 135 0 8 0.763451
22 136 0 8 0.778151
22 137 0 8 0.819614
22 138 0 8 0.821491
22 139 0 8 0.85514
22 140 0 8 0.696968
22 142 0 8 0.788113
22 144 0 8 0.720451
22 146 0 8 0.74942
23 35 0 8 0.697831
23 40 0 8 0.66103
23 41 0 8 0.63196
23 42 0 8 0.905438
23 43 0 8 0.766552
23 45 0 8 0.872963
23 46 0 8 0.869413
23 48 0 8 0.617697
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23 50 0 8 0.804241
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23 71 0 8 0.613308
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23 80 0 8 0.762654
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25 40 0 8 0.596331
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26 77 0 8 0.636332
26 83 0 8 0.716044
26 94 0 8 0.64074
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26 139 0 8 0.710717
26 142 0 8 0.658286
28 53 0 8 0.654713
28 76 0 8 0.622557
28 77 0 8 0.760153
28 136 0 8 0.65516
30 42 0 8 0.683212
31 40 0 8 0.792756
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31 53 0 8 0.738309
31 55 0 8 0.779467
31 56 0 8 0.655025
31 57 0 8 0.649092
31 58 0 8 0.675652
31 77 0 8 0.781862
31 80 0 8 0.736514
31 84 0 8 0.605738
31 87 0 8 0.737512
31 91 0 8 0.671613
31 94 0 8 0.673298
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31 125 0 8 0.61358
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31 134 0 8 0.662512
31 135 0 8 0.655204
31 136 0 8 0.687205
31 137 0 8 0.724749
31 138 0 8 0.719272
31 139 0 8 0.719902
31 142 0 8 0.628704
32 43 0 8 0.710422
33 44 0 8 0.653591
34 44 0 8 0.702355
34 47 0 8 0.604396
35 44 0 8 0.7968
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35 50 0 8 0.712408
35 52 0 8 0.771806
35 53 0 8 0.77746
35 55 0 8 0.745172
35 57 0 8 0.625284
35 87 0 8 0.602675
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35 110 0 8 0.61765
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35 123 0 8 0.737418
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35 126 0 8 0.676659
35 128 0 8 0.657315
35 135 0 8 0.690866
35 136 0 8 0.716092
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35 141 0 8 0.726517
36 45 0 8 0.688655
36 47 0 8 0.602008
38 47 0 8 0.719563
38 50 0 8 0.706043
38 52 0 8 0.713119
38 53 0 8 0.608976
38 130 0 8 0.621626
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38 137 0 8 0.618704
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END