# List of top-scoring protein chains for T0405.t06-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2gf9A	189	16.24		
1a6fA	119	23.25	d.14.1.2	37564
1zbdA	203	23.88	c.37.1.8	32019
3rabA	169	24.38	c.37.1.8	32018
1vjrA	271	25.01	c.108.1.14	100832
2qvkA	192	35.52		
1kqnA	279	42.00	c.26.1.3	77492
1gzuA	290	42.54	c.26.1.3	70822
4gtuA	217	42.67	a.45.1.1,c.47.1.5	17621,32915
1xw5A	217	49.31	a.45.1.1,c.47.1.5	116099,116100
1hnaA	217	49.52	a.45.1.1,c.47.1.5	17604,32898
2c4jA	218	49.61	a.45.1.1,c.47.1.5	129816,129817
2f4eA	180	54.76		
2z0sA	235	56.16		
1pw5A	253	58.54	c.108.1.14	95199
1kkuA	279	64.09	c.26.1.3	72661
1x75A	132	66.34		
1svbA	395	78.43	b.1.18.4,f.10.1.1	21814,43827
1urzA	401	79.18	b.1.18.4,f.10.1.1	99838,99839
2bfwA	200	85.66	c.87.1.8	128456
2dvtA	327	89.13	c.1.9.15	131793