# List of top-scoring protein chains for t06-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2ii1A	301	3.781		
1yzyA	413	7.514	c.146.1.1	124292
1xg7A	250	10.64	a.96.1.6	115281
2f4lA	297	14.50	b.23.3.1	132927
1bg6A	359	18.90	a.100.1.5,c.2.1.6	18810,30214
1v04A	355	19.94	b.68.6.2	100240
1fvuA	133	27.66	d.169.1.1	42345
2fz4A	237	28.23	c.37.1.19	134419
2f4eA	180	34.24		
2e8yA	718	34.36		
1vpbA	451	34.44	d.283.1.1	113950
1j34A	129	41.05	d.169.1.1	84048
1z08A	170	45.43	c.37.1.8	124303
1lu4A	136	45.93	c.47.1.10	91124
1hc7A	477	53.71	c.51.1.1,d.104.1.1,d.68.5.1	60938,60939,60940
1v7pB	128	53.90	d.169.1.1	108407
3chvA	284	56.30		
2fp8A	322	57.53		
2g9wA	138	59.19		
1vl4A	447	61.82	d.283.1.1	108718
2pkhA	148	67.96		
2sasA	185	71.69	a.39.1.5	17258
2gf9A	189	73.26		
1azsC	388	73.93	a.66.1.1,c.37.1.8	18203,32086
1z5yE	149	74.31	c.47.1.10	124498
2fu5C	183	78.74	c.37.1.8	134104
2yquA	455	79.90		
2h1qA	270	81.29		
2fldA	165	84.19		
1d8wA	426	86.30	c.1.15.2	29394
1k0eA	453	89.08	d.161.1.1	67938