# List of top-scoring protein chains for t04-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2r7hA	177	5.596		
2i5nH	258	5.661	b.41.1.1,f.23.10.1	137064,137065
1vpbA	451	6.213	d.283.1.1	113950
1gw5A	621	12.88	a.118.1.10	70629
2vglA	621	13.12		
1xqoA	256	14.43	a.96.1.6	115853
1qu7A	227	16.36	h.4.5.1	45789
1ibrB	462	19.62	a.118.1.1	19120
1xebA	150	28.80	d.108.1.1	115219
1gcuA	295	29.06	c.2.1.3,d.81.1.4	30063,39978
2akaB	299	29.17	c.37.1.8	126914
1rurH	218	30.08	b.1.1.1,b.1.1.2	97879,97880
1xg7A	250	33.23	a.96.1.6	115281
1bqcA	302	33.39	c.1.8.3	28831
2sakA	121	38.50	d.15.5.1	37711
1sat	471	40.13		
2c4wA	176	41.42		
1uw0A	117	44.85	g.39.1.12	108063
1nezG	128	54.45	b.1.1.1	85592
2hqyA	305	64.54		
1dfcA	493	65.00	b.42.5.1,b.42.5.1,b.42.5.1,b.42.5.1	25616,25617,25618,25619
1ywuA	149	67.16	b.45.2.1	124164
1sumB	235	70.33	a.7.12.1	106025
1we0A	187	72.80	c.47.1.10	120930
1rw6A	210	73.60	a.47.4.1	105113
1vl4A	447	77.56	d.283.1.1	108718
1u6mA	199	80.45	d.108.1.1	113069
1z6kA	293	84.10		
1a0pA	290	89.92	a.60.9.1,d.163.1.1	18105,42165