PFRMAT RR
TARGET T0405
AUTHOR 4008-1775-0004
REMARK From group SAM-TO6 under the direction of
REMARK Kevin Karplus.
REMARK Residue-residue contact predictions
REMARK  by George Shackelford and Kevin Karplus
REMARK The value given is an approximation of the probability
REMARK as provided by the neural network.
REMARK The predictions are limited to a score >= .18 which
REMARK is an approximation of the probability.
REMARK
METHOD The predictor is an artificial neural network.
METHOD NN: con.aa5str2_5near5nsep5.entmi_epplcc.th62.47.net
METHOD Inputs may include separation and sequence length,
METHOD e-value statistic based on mutual information values,
METHOD a statistic based on propensity of residues in contact.
METHOD Other inputs are distributions from alignments and
METHOD secondary predictions from SAM-t04 and/or SAM-t06 of
METHOD the University of California, Santa Cruz
MODEL 1
MNETEKLVAALLERNFGKNIGTRYPGNEAAQMRAEEVIGEIAIVIAPLVE
KLGIENKTVKKTIPFLYELQKNQFCDMSAYPYPLLLVNGTSTDTEKYWRD
LPTYWTDDANKIVLPYVLEHIKNNKVRQKLLAFHAWLLGEVVEMNEALGA
DFRVKLVFESDMRIRLRVYEVEQIAIEVHFLDNHDTEQQHLGYDVSLDAD
FTEKARLLLRQGILTENLGLEALKAYMKSVLPIAHSLKNLEHLTFEETKK
LTKLLTQEEPKIMEDTDLTSKALDFLQKAAQQ
213 222 0 8 0.850891
213 223 0 8 0.858569
213 224 0 8 0.74475
213 225 0 8 0.770019
213 226 0 8 0.799619
213 227 0 8 0.809412
213 228 0 8 0.66924
213 229 0 8 0.681769
213 230 0 8 0.820485
213 231 0 8 0.840682
213 232 0 8 0.747838
213 233 0 8 0.835959
213 234 0 8 0.802942
213 235 0 8 0.760264
213 236 0 8 0.677389
213 237 0 8 0.800028
213 238 0 8 0.482804
213 239 0 8 0.646069
213 240 0 8 0.820721
213 241 0 8 0.504912
213 242 0 8 0.667963
213 243 0 8 0.827199
213 244 0 8 0.638098
213 245 0 8 0.64558
213 246 0 8 0.650808
213 247 0 8 0.695174
213 248 0 8 0.739123
213 249 0 8 0.683102
213 250 0 8 0.592546
213 251 0 8 0.805821
213 252 0 8 0.767484
213 253 0 8 0.739938
213 254 0 8 0.872407
213 255 0 8 0.87037
213 256 0 8 0.638202
213 257 0 8 0.673106
213 258 0 8 0.658702
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213 260 0 8 0.768395
214 223 0 8 0.899116
214 224 0 8 0.787912
214 225 0 8 0.810865
214 226 0 8 0.84126
214 227 0 8 0.855196
214 228 0 8 0.711115
214 229 0 8 0.723594
214 230 0 8 0.867304
214 231 0 8 0.883899
214 232 0 8 0.799352
214 233 0 8 0.872377
214 234 0 8 0.845122
214 235 0 8 0.799958
214 236 0 8 0.725804
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214 238 0 8 0.540138
214 239 0 8 0.691326
214 240 0 8 0.863075
214 241 0 8 0.5673
214 242 0 8 0.7104
214 243 0 8 0.861822
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214 245 0 8 0.695829
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214 247 0 8 0.728592
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214 255 0 8 0.885042
214 256 0 8 0.640126
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215 224 0 8 0.685045
215 225 0 8 0.713807
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215 236 0 8 0.613886
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215 245 0 8 0.566796
215 246 0 8 0.559775
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215 250 0 8 0.519666
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215 252 0 8 0.576278
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215 254 0 8 0.786137
215 255 0 8 0.783077
215 256 0 8 0.489207
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215 260 0 8 0.641195
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216 229 0 8 0.672776
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216 260 0 8 0.596644
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217 229 0 8 0.611441
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217 231 0 8 0.758146
217 232 0 8 0.656447
217 233 0 8 0.772479
217 234 0 8 0.73999
217 235 0 8 0.689719
217 236 0 8 0.610983
217 237 0 8 0.747576
217 238 0 8 0.402126
217 239 0 8 0.58848
217 240 0 8 0.765619
217 241 0 8 0.418255
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217 244 0 8 0.554066
217 245 0 8 0.587877
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217 247 0 8 0.644388
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217 250 0 8 0.531704
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218 227 0 8 0.822954
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218 230 0 8 0.824327
218 231 0 8 0.83641
218 232 0 8 0.736453
218 233 0 8 0.8298
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218 235 0 8 0.754321
218 236 0 8 0.666255
218 237 0 8 0.798929
218 238 0 8 0.474522
218 239 0 8 0.64303
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218 241 0 8 0.492246
218 242 0 8 0.66092
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218 244 0 8 0.615663
218 245 0 8 0.628746
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218 250 0 8 0.576564
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218 253 0 8 0.521958
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218 255 0 8 0.740361
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218 260 0 8 0.643134
219 228 0 8 0.678157
219 229 0 8 0.69704
219 230 0 8 0.785212
219 231 0 8 0.788907
219 232 0 8 0.730237
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219 236 0 8 0.696456
219 237 0 8 0.78569
219 238 0 8 0.520863
219 239 0 8 0.683274
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219 244 0 8 0.651206
219 245 0 8 0.681922
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219 249 0 8 0.677943
219 250 0 8 0.606881
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219 260 0 8 0.531504
220 229 0 8 0.803497
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220 231 0 8 0.909264
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220 252 0 8 0.650601
220 253 0 8 0.644365
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220 255 0 8 0.834563
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220 258 0 8 0.597638
220 259 0 8 0.69756
220 260 0 8 0.725347
221 230 0 8 0.893091
221 231 0 8 0.904999
221 232 0 8 0.853822
221 233 0 8 0.884729
221 234 0 8 0.867367
221 235 0 8 0.841615
221 236 0 8 0.799191
221 237 0 8 0.871398
221 238 0 8 0.682254
221 239 0 8 0.794024
221 240 0 8 0.890878
221 241 0 8 0.724035
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221 244 0 8 0.703086
221 245 0 8 0.719831
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221 260 0 8 0.570766
222 231 0 8 0.936186
222 232 0 8 0.876303
222 233 0 8 0.921322
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END