T0404.t2k.w0.5

Sequence_ID	Length	Evalue	FSSP-rep	SCOP_domain
2cz4A	119	6.88e-19		d.58.5.1
2gw8A	114	3.74e-06
2ns1B	116	9.94e-06
2piiA	112	1.19e-05		d.58.5.1
2eg2A	112	1.65e-05
1hwuA	112	1.91e-05		d.58.5.1
1gnkA	112	2.15e-05	2pii	d.58.5.1
2gnkA	112	2.93e-05	2pii	d.58.5.1
3bzqA	114	4.40e-05
1ul3A	112	2.58e-04		d.58.5.1
2v5hG	112	2.99e-04
2o66A	135	5.30e-04
1qy7A	112	6.08e-04		d.58.5.1
1o51A	114	1.63e-03		d.58.5.4
2j9dE	119	3.49e-03
2j9cA	119	4.22e-03
1vfjA	116	6.69e-03		d.58.5.1
2dclA	127	9.80e-03
3b3xA	265	1.05e+00
1i2sA	282	1.08e+00		e.3.1.1
1w7fA	307	1.09e+00
1mseC	105	1.21e+00	1a5j	a.4.1.3
				a.4.1.3
1gv2A	105	1.21e+00		a.4.1.3
				a.4.1.3
2uxyA	341	1.35e+00
2qyxA	238	1.35e+00
1h89C	159	1.70e+00		a.4.1.3
				a.4.1.3
				a.4.1.3
2nqzA	385	1.84e+00
2nsoA	386	1.84e+00
2opfA	262	2.80e+00
2oq4A	262	2.81e+00
1q3cA	262	2.81e+00		a.156.1.2
				b.113.1.1
				g.39.1.8
1k3xA	262	2.81e+00		a.156.1.2
				b.113.1.1
				g.39.1.8
2hmaA	376	2.89e+00
1zt2A	330	3.39e+00		d.264.1.1
1r8oA	96	3.47e+00		b.42.4.1
2ysaA	55	3.80e+00
1a5jA	110	4.89e+00		a.4.1.3
				a.4.1.3
2a90A	240	5.69e+00
2gmgA	105	6.00e+00
2ozhA	142	6.02e+00
3boeA	210	6.11e+00
1ewkA	490	6.27e+00	1ewkA	c.93.1.1
1vkcA	158	6.44e+00		d.108.1.1
2pjvA	31	6.47e+00
1pujA	282	6.79e+00		c.37.1.8
1wkdA	386	6.82e+00		c.1.20.1
1efzA	386	6.82e+00	1pud	c.1.20.1
2ew5A	181	6.90e+00
2h57A	190	6.95e+00
3bq7A	81	6.97e+00
1uwiA	489	6.98e+00		c.1.8.4
1pxgA	382	7.08e+00		c.1.20.1
1wkeA	386	7.11e+00		c.1.20.1
1wkfA	386	7.24e+00		c.1.20.1
1ozqA	386	7.38e+00		c.1.20.1
2nt4A	127	7.41e+00
2eeiA	106	7.42e+00
1y5wA	385	7.42e+00		c.1.20.1
1r5yA	386	7.43e+00		c.1.20.1
2eihA	343	7.49e+00
2gkgA	127	7.57e+00
2nt3A	127	7.62e+00
2okoA	385	7.82e+00
2z1vA	386	7.84e+00
1zgzA	122	8.02e+00		c.23.1.1
1zvfA	176	8.31e+00
1josA	128	8.92e+00		d.52.7.1
3b9oA	440	8.93e+00
1pnuE	177	9.30e+00		i.1.1.1
2plqA	348	9.33e+00
1nwyE	185	1.00e+01		i.1.1.2
1udrA	129	1.01e+01	3chy	c.23.1.1
1bvsA	203	1.06e+01	1hjp	a.5.1.1
				a.60.2.1
				b.40.4.2
1onfA	500	1.10e+01		c.3.1.5
				c.3.1.5
				d.87.1.1
1nkwE	212	1.13e+01		i.1.1.2
3bw6A	144	1.15e+01
1lf2A	331	1.18e+01		b.50.1.2
2igxA	329	1.18e+01		b.50.1.2
1xdhA	331	1.19e+01		b.50.1.2
6pfkA	319	1.26e+01	3pfk	c.89.1.1
2h4mA	865	1.29e+01
2helA	306	1.31e+01
1pfzA	380	1.33e+01	1smrA	b.50.1.2
1mtoA	319	1.34e+01		c.89.1.1
1vm7A	311	1.36e+01		c.72.1.1
2elcA	329	1.39e+01
1ffxA	451	1.39e+01	1tubA	i.10.1.1

Sequence_ID	Length	Evalue	FSSP-rep	SCOP_domain
1sa0A	451	1.39e+01		c.32.1.1
				d.79.2.1
4pfkA	319	1.39e+01		c.89.1.1
1gvdA	52	1.44e+01		a.4.1.3
1tvkA	440	1.47e+01		c.32.1.1
				d.79.2.1
1tubA	440	1.47e+01	1tubA	c.32.1.1
				d.79.2.1
1i78A	297	1.47e+01		f.4.4.1
1mfgA	95	1.48e+01		b.36.1.1
1jffA	451	1.52e+01		c.32.1.1
				d.79.2.1
1s7mA	174	1.52e+01		b.144.1.1
2ghpA	292	1.53e+01		d.58.7.1
				d.58.7.1
				d.58.7.1
2bjuA	453	1.56e+01		b.50.1.2
1vaxA	287	1.66e+01		d.96.1.4
				d.96.1.4
2rgcA	166	1.73e+01
2yzcA	302	1.74e+01
1u6mA	199	1.75e+01		d.108.1.1
3ch3X	265	1.79e+01
1h8mA	140	1.82e+01	1h8mA	d.110.4.1
1gowA	489	1.82e+01	1qvbA	c.1.8.4
1qcrA	446	1.84e+01	1be3A	d.185.1.1
				d.185.1.1
1ppjA	446	1.84e+01		d.185.1.1
				d.185.1.1
3cg0A	140	1.88e+01
2jepA	395	1.90e+01
1sqbA	480	1.91e+01		d.185.1.1
				d.185.1.1
2ha8A	184	1.92e+01
2h3lA	103	1.95e+01		b.36.1.1
2j8eA	128	2.01e+01
1gv5A	52	2.03e+01		a.4.1.3
2f2uA	402	2.14e+01
1bucA	383	2.15e+01	3mdeA	a.29.3.1
				e.6.1.1
2f46A	156	2.15e+01
1uwsA	489	2.20e+01		c.1.8.4
1vboA	149	2.24e+01		b.77.3.1
2nsmA	439	2.24e+01
1fseA	74	2.27e+01	1fseA	a.4.6.2
1i4wA	353	2.31e+01		c.66.1.24
1jajA	174	2.32e+01		d.218.1.2
1k85A	88	2.36e+01		b.1.2.1
1pryA	227	2.43e+01		c.66.1.3
1s1hI	142	2.56e+01		i.1.1.1
2d42A	249	2.57e+01
1mblA	256	2.58e+01	1btl	e.3.1.1
2z98A	200	2.61e+01
2rggA	166	2.64e+01
4blmA	265	2.67e+01	1btl	e.3.1.1
2o2sA	315	2.75e+01
2ftsA	419	2.76e+01		b.85.6.1
				b.103.1.1
				c.57.1.2
1tikA	213	2.76e+01		c.23.5.3
2dgdA	223	2.76e+01
1t3eA	421	2.77e+01		b.85.6.1
				b.103.1.1
				c.57.1.2
1nbuA	119	2.81e+01		d.96.1.3
2rd5A	298	2.82e+01
1vlzA	128	2.92e+01	3chy	c.23.1.1
1mbgA	52	2.95e+01		a.4.1.3
2o18A	340	2.96e+01
1ew4A	106	2.96e+01	1ew4A	d.82.2.1
1soyA	108	3.06e+01		d.82.2.1
1oyiA	82	3.11e+01		a.4.5.19
2cc1A	262	3.12e+01		e.3.1.1
3cggA	195	3.17e+01
1gf0A	130	3.24e+01	3lzt	d.2.1.2
1fs0G	230	3.28e+01	1fs0G	c.49.2.1
1uocA	289	3.36e+01		c.55.3.9
1z92B	219	3.37e+01		g.18.1.1
				g.18.1.1
2p11A	231	3.46e+01
2bklA	695	3.55e+01
1su8A	636	3.64e+01		e.26.1.2
2gv0A	131	3.68e+01
1jhjA	171	3.69e+01		b.18.1.9
2id7A	128	3.70e+01
3b51X	656	3.74e+01
2egxA	269	3.76e+01
1jg5A	83	3.78e+01		d.205.1.1
1is8K	84	3.83e+01		d.205.1.1
1cj6A	130	3.84e+01	3lzt	d.2.1.2
1ougA	130	3.85e+01		d.2.1.2
1j5xA	342	3.89e+01		c.80.1.1
2crlA	98	3.91e+01
1z68A	719	3.92e+01
1wjlA	90	3.93e+01		b.36.1.1
1wp1A	474	3.94e+01		f.5.1.1
1tkjA	284	3.96e+01		c.56.5.4
1qq9A	284	3.96e+01	1xjo	c.56.5.4

Please cite the following papers:

Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001
Karplus, K. and Karchin, R. and Draper, J. and Casper, J. and Mandel-Gutfreund, Y. and Diekhans, M. and Hughey, R. ``Combining local-structure, fold-recognition, and new-fold methods for protein structure prediction'' Proteins: Structure Function and Genetics53(S6):491-496,15 Oct 2003
Rachel Karchin, Melissa Cline, Yael Mandel-Gutfreund, and Kevin Karplus. ``Hidden Markov models that use predicted local structure for fold recognition: alphabets of backbone geometry.'' Proteins: Structure, Function, and Genetics, 51(4):504--514, June 2003.