Best Alignments for T0403

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2fgqX	9.4236e-39	2fgqX/T0403-2fgqX-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	f.4.3.1
2j1nA	3.3489e-35	2j1nA/T0403-2j1nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1hxxA	1.3430e-34	1hxxA/T0403-1hxxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	f.4.3.1
2por	2.2606e-34	2por/T0403-2por-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2porA	1.0980e-33	2porA/T0403-2porA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	f.4.3.1
3prnA	4.4745e-31	3prnA/T0403-3prnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	f.4.3.1
3prn	1.3732e-30	3prn/T0403-3prn-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2o4vA	1.1915e-14	2o4vA/T0403-2o4vA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1t16A	1.5010e-04	1t16A/T0403-1t16A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	f.4.3.4
2gufA	5.2528e-03	2gufA/T0403-2gufA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	f.4.3.3
1nqeA	9.8191e-03	1nqeA/T0403-1nqeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	f.4.3.3
1fepA	1.8843e-02	1fepA/T0403-1fepA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	f.4.3.3
2mprA	4.7055e-02	2mprA/T0403-2mprA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	f.4.3.2
1a0tP	5.2296e-02	1a0tP/T0403-1a0tP-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	f.4.3.2
1xkwA	6.0335e-02	1xkwA/T0403-1xkwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hdiA	1.2937e-01	2hdiA/T0403-2hdiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2odjA	1.5580e-01	2odjA/T0403-2odjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1p4tA	1.8669e-01	1p4tA/T0403-1p4tA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	f.4.1.1
1kmoA	2.2834e-01	1kmoA/T0403-1kmoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	f.4.3.3
1qfgA	3.0621e-01	1qfgA/T0403-1qfgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	f.4.3.3

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001