T0403.t2k.w0.5

Sequence_ID	Length	Evalue	FSSP-rep	SCOP_domain
2fgqX	332	1.57e-38		f.4.3.1
1e54A	332	1.57e-38	1e54A	f.4.3.1
2fgrA	332	2.59e-38		f.4.3.1
1hxuA	340	3.09e-21	2omf	f.4.3.1
2omfA	340	4.27e-21		f.4.3.1
1hxxA	340	4.82e-21	2omf	f.4.3.1
1bt9A	340	5.40e-21	2omf	f.4.3.1
1mpfA	340	5.48e-21		f.4.3.1
1gfoA	340	1.01e-20		f.4.3.1
1phoA	330	1.03e-20		f.4.3.1
1gfmA	340	1.20e-20		f.4.3.1
1gfpA	340	1.22e-20		f.4.3.1
2ixwA	343	1.26e-20
1osmA	342	2.76e-20	2omf	f.4.3.1
1gfqA	340	3.35e-20		f.4.3.1
2j1nA	346	4.71e-20
1gfnA	334	7.77e-20		f.4.3.1
2ixxA	354	4.77e-19
1hxtA	340	8.26e-19	2omf	f.4.3.1
2porA	301	5.22e-06		f.4.3.1
2prnA	289	3.51e-01		f.4.3.1
1f74A	293	5.32e-01	1nal3	c.1.10.1
1mmaA	762	5.65e-01		b.34.3.1
				c.37.1.9
1w9kA	770	5.92e-01
1d0yA	761	6.03e-01	1lvk	b.34.3.1
				c.37.1.9
1yv3A	762	6.08e-01
2akaA	776	6.23e-01
1jx2A	776	6.25e-01		b.34.3.1
				c.37.1.9
1w9lA	770	6.28e-01
1w9iA	770	6.39e-01
1w9jA	770	6.70e-01
2odjA	428	7.08e-01
1prnA	289	7.42e-01		f.4.3.1
6prnA	289	7.51e-01		f.4.3.1
5prnA	289	7.56e-01		f.4.3.1
1mmnA	762	7.66e-01		b.34.3.1
				c.37.1.9
3prnA	289	8.88e-01		f.4.3.1
7prnA	289	9.07e-01		f.4.3.1
8prnA	289	9.14e-01		f.4.3.1
1fmvA	761	9.55e-01	1lvk	b.34.3.1
				c.37.1.9
1vomA	762	9.59e-01		b.34.3.1
				c.37.1.9
1lvkA	762	9.85e-01		b.34.3.1
				c.37.1.9
1bh3A	289	1.01e+00		f.4.3.1
1g8xA	1010	1.12e+00	1lvk	k.1.1.1
1qd6C	240	1.34e+00	1qd5A
2iciA	227	1.35e+00
1p4tA	155	1.43e+00		f.4.1.1
2d6oX	159	1.63e+00
1fw3A	275	1.70e+00	1qd5A	f.4.2.1
1qd5A	275	1.70e+00	1qd5A	f.4.2.1
2d6mA	159	1.84e+00
2dj0A	137	2.15e+00
1ilzA	275	2.22e+00		f.4.2.1
1mmgA	762	2.70e+00		b.34.3.1
				c.37.1.9
1i78A	297	2.96e+00		f.4.4.1
1zkaA	110	3.66e+00
1tk1A	260	3.96e+00		d.248.1.1
1nhcA	336	3.97e+00		b.80.1.3
2qdrA	303	4.04e+00
2c58A	537	4.76e+00		c.69.1.1
1txkA	498	4.88e+00		b.1.18.2
				b.30.5.9
1zoyB	252	5.44e+00
1eeaA	534	5.75e+00	2bce	c.69.1.1
2cekA	535	5.76e+00		c.69.1.1
1gqrA	532	5.76e+00		c.69.1.1
2dfpA	534	5.76e+00	2bce	c.69.1.1
1ea5A	537	5.77e+00	2bce	c.69.1.1
1ut6A	537	5.77e+00		c.69.1.1
1w6rA	543	5.80e+00		c.69.1.1
1h6s1	307	5.90e+00
1txnA	328	6.35e+00		d.248.1.1
1tklA	326	6.39e+00		d.248.1.1
1m93B	245	6.49e+00
2b3rA	134	6.76e+00
2z3oA	233	7.00e+00
2f1cX	286	7.13e+00
2dpsA	254	7.19e+00
1wiwA	290	7.42e+00		c.80.1.1
2rcyA	262	7.56e+00
2cxaA	256	8.50e+00		d.108.1.6
1c8oA	300	8.52e+00	1c8oA	e.1.1.1
2jqyA	280	9.25e+00
2iwvA	281	9.41e+00
2h88B	252	9.43e+00
2fbwB	252	9.43e+00
2dpyA	438	1.00e+01
1f0cA	305	1.06e+01	1c8oA	e.1.1.1
1nqfA	594	1.11e+01		f.4.3.3
1mqsA	671	1.13e+01		e.25.1.1
1vb3A	428	1.20e+01		c.79.1.1
1rhi3	236	1.32e+01	1aym3

Sequence_ID	Length	Evalue	FSSP-rep	SCOP_domain
1tiyA	164	1.36e+01		c.97.1.2
1mjcA	69	1.38e+01		b.40.4.5
1uxvA	501	1.39e+01		c.82.1.1
2gufA	594	1.45e+01		f.4.3.3
1nqeA	594	1.45e+01		f.4.3.3
2gskA	590	1.45e+01		f.4.3.3
1uxtA	501	1.48e+01		c.82.1.1
1h5rA	293	1.50e+01		c.68.1.6
1h5sA	293	1.54e+01		c.68.1.6
1h5sD	293	1.60e+01		c.68.1.6
2g7cA	255	1.63e+01
1h5rB	293	1.66e+01		c.68.1.6
2nyyA	1295	1.68e+01
2gt4A	160	1.74e+01
2agkA	260	1.75e+01
1iinA	292	1.76e+01	1g0rA	c.68.1.6
1wkqA	164	1.78e+01		c.97.1.2
1dbhA	354	1.78e+01	1awe	a.87.1.1
				b.55.1.1
2p51A	333	1.79e+01
2ozuA	284	1.88e+01		d.108.1.1
1mp5A	292	1.94e+01		c.68.1.6
1t16A	427	1.98e+01		f.4.3.4
2gf3A	389	1.98e+01		c.3.1.2
				d.16.1.3
1el5A	389	1.98e+01	1b3mA	c.3.1.2
				d.16.1.3
1nxuA	333	2.02e+01		c.122.1.1
1ryaA	160	2.04e+01		d.113.1.5
3bhkA	390	2.06e+01
1s20A	340	2.08e+01		c.122.1.1
1mp4A	292	2.15e+01		c.68.1.6
1ncqC	236	2.17e+01		b.121.4.1
2abrA	418	2.25e+01		d.126.1.4
2a9gA	418	2.51e+01		d.126.1.4
2aafA	418	2.55e+01		d.126.1.4
1rxxA	421	2.56e+01		d.126.1.4
1g9xA	257	2.70e+01		c.37.1.12
1bunA	120	2.72e+01	1poa	a.133.1.2
1zk9A	110	2.87e+01
2fp8A	322	2.92e+01
2aciA	418	2.94e+01		d.126.1.4
1jawA	440	2.97e+01		c.55.2.1
				d.127.1.1
3cihA	739	3.00e+01
1qwlA	505	3.06e+01		e.5.1.1
1po0A	751	3.10e+01		f.4.3.3
2ovjA	201	3.14e+01
2qntA	141	3.14e+01
2hfcA	239	3.16e+01
1qfxA	460	3.17e+01	1qfxA	c.60.1.2
2okxA	956	3.18e+01
1kmoA	774	3.19e+01		f.4.3.3
2uz9A	476	3.23e+01
2o3oA	254	3.28e+01
1xahA	354	3.33e+01
1nekB	238	3.43e+01		a.1.2.1
				d.15.4.2
1l9cA	389	3.44e+01		c.3.1.2
				d.16.1.3
2pggA	774	3.54e+01
1qy3A	229	3.55e+01		d.22.1.1
1qxtA	230	3.55e+01		d.22.1.1
2b2aA	199	3.57e+01
2pusA	852	3.63e+01
1tlyA	278	3.83e+01		f.4.6.1
1uf0A	116	3.88e+01		d.15.11.1
1gajA	257	3.93e+01	1gajA	c.37.1.12
1z7s1	298	3.94e+01
1y5lC	225	3.97e+01

Please cite the following papers:

Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001
Karplus, K. and Karchin, R. and Draper, J. and Casper, J. and Mandel-Gutfreund, Y. and Diekhans, M. and Hughey, R. ``Combining local-structure, fold-recognition, and new-fold methods for protein structure prediction'' Proteins: Structure Function and Genetics53(S6):491-496,15 Oct 2003
Rachel Karchin, Melissa Cline, Yael Mandel-Gutfreund, and Kevin Karplus. ``Hidden Markov models that use predicted local structure for fold recognition: alphabets of backbone geometry.'' Proteins: Structure, Function, and Genetics, 51(4):504--514, June 2003.