# List of top-scoring protein chains for T0401.t2k-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2prvA	153	0.09093		
2icgA	160	0.3281		
2pagA	135	15.14		
1su1A	208	19.47	d.159.1.7	106016
1s1iQ	100	22.09	i.1.1.1	105191
1f5mA	180	28.09	d.110.2.1	40895
1cjmA	295	67.25	c.37.1.5	31950
2o8kA	63	72.56		
2ahqA	76	77.64		
1tk1A	260	82.71	d.248.1.1	107066
1txnA	328	83.20	d.248.1.1	112779
1tklA	326	83.24	d.248.1.1	107105
1jkeA	145	85.07	c.110.1.1	66791
1kwmA	402	85.91	c.56.5.1,d.58.3.1	73079,73080