# List of top-scoring protein chains for t2k-w0.5-1-str2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2icgA	160	8.05e-06		
2prvA	153	3.34e-05		
2pagA	135	0.03418		
2bkkA	264	9.142		
2ahqA	76	11.89		
1ixcA	294	20.53	a.4.5.37,c.94.1.1	83764,83765
1h99A	224	20.74	a.142.1.1,a.142.1.1	60814,60815
1qqcA	773	21.66	c.55.3.5,e.8.1.1	33724,43013
2tbd	134	26.26		
2g09A	297	36.18		
1t9hA	307	37.17	b.40.4.5,c.37.1.8	112358,112359
1kb9D	246	39.81	a.3.1.3,f.23.11.1	77317,77318
1tkeA	224	40.61	d.15.10.1,d.67.1.1	112470,112471
1je3A	97	44.01	d.68.3.3	71637
1t8kA	77	45.14	a.28.1.1	106666
2bazA	142	51.85		
1l0iA	78	56.51	a.28.1.1	77643
1z2mA	155	59.66	d.15.1.1,d.15.1.1	124387,124388
1js3A	486	60.45	c.67.1.6	67215
2z79A	185	62.25		
1klpA	115	69.17	a.28.1.1	72721
1ro0A	216	71.28	d.264.1.2	97664
2j5aA	110	74.95		
2cy5A	140	76.65	b.55.1.2	131018
2i8lA	156	79.13		
1u7eB	154	81.58		
1dcjA	81	82.43	d.68.3.3	59115
1ro2A	216	82.83	d.264.1.2	97665
2hyxA	352	87.31		
1qcrD	75	87.70	a.3.1.3,f.23.11.1	15956,43674
1vp6A	138	88.80	b.82.3.2	113939