# List of top-scoring protein chains for t2k-w0.5-1-o_notor2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2icgA	160	6.51e-06		
2prvA	153	8.75e-06		
2pagA	135	0.01088		
1slqA	278	9.589	f.47.1.1	105719
2bkkA	264	14.22		
1h99A	224	16.35	a.142.1.1,a.142.1.1	60814,60815
2ahqA	76	16.75		
1ixcA	294	17.63	a.4.5.37,c.94.1.1	83764,83765
1tkeA	224	32.98	d.15.10.1,d.67.1.1	112470,112471
2z2nA	299	34.29		
1t8kA	77	35.85	a.28.1.1	106666
2amdA	311	42.93		
2g09A	297	43.35		
2i8lA	156	44.76		
2z79A	185	45.41		
1kb9D	246	47.18	a.3.1.3,f.23.11.1	77317,77318
1bw3A	125	52.75	b.52.1.2	26899
2fqxA	318	52.76		
2bazA	142	53.09		
1t9hA	307	53.43	b.40.4.5,c.37.1.8	112358,112359
1l0iA	78	53.67	a.28.1.1	77643
1u7eB	154	54.02		
1vp6A	138	58.83	b.82.3.2	113939
2j5aA	110	60.24		
1eejA	216	62.04	c.47.1.9,d.17.3.1	33057,38071
1je3A	97	62.90	d.68.3.3	71637
1qqcA	773	64.05	c.55.3.5,e.8.1.1	33724,43013
1q3eA	207	65.00	b.82.3.2	95669
1tgoA	773	67.35	c.55.3.5,e.8.1.1	33721,43010
2c0dA	221	67.54		
2q8nA	460	67.59		
2oa2A	148	68.02		
1j9bA	141	75.95	c.47.1.12	66459
1m1hA	248	80.39	b.114.1.1,d.58.42.1	78415,78416
2tbd	134	81.52		
3bqpA	80	84.34