# List of top-scoring protein chains for t2k-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2icgA	160	8.29e-06		
2prvA	153	1.74e-05		
2pagA	135	0.02516		
2bkkA	264	7.853		
1slqA	278	13.50	f.47.1.1	105719
2ahqA	76	14.89		
1h99A	224	21.69	a.142.1.1,a.142.1.1	60814,60815
1ixcA	294	24.53	a.4.5.37,c.94.1.1	83764,83765
2g09A	297	26.90		
1qqcA	773	29.54	c.55.3.5,e.8.1.1	33724,43013
2tbd	134	31.24		
1kb9D	246	32.06	a.3.1.3,f.23.11.1	77317,77318
1t9hA	307	45.34	b.40.4.5,c.37.1.8	112358,112359
1tkeA	224	50.55	d.15.10.1,d.67.1.1	112470,112471
1je3A	97	63.18	d.68.3.3	71637
2z79A	185	63.46		
2i8lA	156	63.49		
1u79A	129	64.18	d.26.1.1	107714
1kwmA	402	64.96	c.56.5.1,d.58.3.1	73079,73080
1tgoA	773	66.12	c.55.3.5,e.8.1.1	33721,43010
2fqxA	318	67.99		
1m4lA	307	68.42	c.56.5.1	78604
1ro0A	216	69.77	d.264.1.2	97664
1ro2A	216	70.78	d.264.1.2	97665
2bazA	142	70.80		
2c0dA	221	71.03		
1u7eB	154	72.81		
1vp6A	138	73.98	b.82.3.2	113939
1t8kA	77	74.70	a.28.1.1	106666
1e3yA	104	80.93	a.77.1.2	18426
1l0iA	78	81.49	a.28.1.1	77643
2amdA	311	82.27		
1ko7A	314	82.76	c.98.2.1,c.91.1.2	72797,72798
2j5aA	110	85.05