# List of top-scoring protein chains for t2k-w0.5-1-CB8-sep9-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2prvA	153	2.52e-05		
2icgA	160	4.26e-05		
2pagA	135	0.01486		
2bkkA	264	6.415		
1ro0A	216	9.904	d.264.1.2	97664
1ro2A	216	12.62	d.264.1.2	97665
1ixcA	294	18.32	a.4.5.37,c.94.1.1	83764,83765
1glqA	209	22.57	a.45.1.1,c.47.1.5	17588,32882
1qqcA	773	23.91	c.55.3.5,e.8.1.1	33724,43013
2vil	126	25.40		
1vp4A	425	25.46	c.67.1.1	113935
1js3A	486	31.83	c.67.1.6	67215
2ahqA	76	35.60		
2tbd	134	40.94		
1tgoA	773	45.51	c.55.3.5,e.8.1.1	33721,43010
2cy5A	140	52.61	b.55.1.2	131018
1gseA	221	56.53	a.45.1.1,c.47.1.5	17667,32961
1s3cA	141	62.62		
2g09A	297	67.81		
1bbpA	173	70.18	b.60.1.1	27147
1f3aA	222	72.56	a.45.1.1,c.47.1.5	17701,32995
1tkeA	224	73.84	d.15.10.1,d.67.1.1	112470,112471
1nm1G	125	75.85	d.109.1.1	80653
3ce7A	107	75.93		
1l0iA	78	77.95	a.28.1.1	77643
1dv5A	80	81.55	a.28.1.3	59139
1j9bA	141	82.57	c.47.1.12	66459
3nul	130	82.80		
1t8kA	77	85.24	a.28.1.1	106666
1d4xG	126	87.61	d.109.1.1	59109
1wloA	136	89.37