Best Alignments for T0399

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2g2uB	2.4859e-07	2g2uB/T0399-2g2uB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.98.1.1
1jtgB	2.7245e-07	1jtgB/T0399-1jtgB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.98.1.1
2h36X	4.4427e+00	2h36X/T0399-2h36X-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2fyxA	7.4227e+00	2fyxA/T0399-2fyxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.58.57.1
2o8xA	1.2151e+01	2o8xA/T0399-2o8xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2a6mA	1.3805e+01	2a6mA/T0399-2a6mA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.58.57.1
2f5gA	2.6078e+01	2f5gA/T0399-2f5gA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.58.57.1
1igtB	2.7900e+01	1igtB/T0399-1igtB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1dq3A	3.4170e+01	1dq3A/T0399-1dq3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1igtD	3.4669e+01	1igtD/T0399-1igtD-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2h27A	3.8378e+01	2h27A/T0399-2h27A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.13.2
2vjvA	3.8721e+01	2vjvA/T0399-2vjvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vmbA	4.0436e+01	1vmbA/T0399-1vmbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.58.14.1
1ucrA	4.3141e+01	1ucrA/T0399-1ucrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1r69	4.3425e+01	1r69/T0399-1r69-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1tygB	4.3644e+01	1tygB/T0399-1tygB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.15.3.2
1q8bA	5.1062e+01	1q8bA/T0399-1q8bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bemA	5.2598e+01	3bemA/T0399-3bemA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1mzuA	5.3847e+01	1mzuA/T0399-1mzuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1nwzA	5.6649e+01	1nwzA/T0399-1nwzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001