Best Alignments for T0399

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2g2uB	3.5209e-10	2g2uB/T0399-2g2uB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.98.1.1
1jtgB	3.8377e-10	1jtgB/T0399-1jtgB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.98.1.1
2o8xA	1.3997e+01	2o8xA/T0399-2o8xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2h27A	1.7153e+01	2h27A/T0399-2h27A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.13.2
2h36X	2.5991e+01	2h36X/T0399-2h36X-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1utxA	4.5020e+01	1utxA/T0399-1utxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.35.1.3
1r69A	5.4860e+01	1r69A/T0399-1r69A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.35.1.2
2croA	5.5179e+01	2croA/T0399-2croA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.35.1.2
1adrA	5.5359e+01	1adrA/T0399-1adrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.35.1.2
2fbhA	5.5958e+01	2fbhA/T0399-2fbhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.28
2b5aA	5.7197e+01	2b5aA/T0399-2b5aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.35.1.3
2guzA	5.7425e+01	2guzA/T0399-2guzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1r69	5.8241e+01	1r69/T0399-1r69-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2cro	6.0693e+01	2cro/T0399-2cro-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1y7yA	6.2369e+01	1y7yA/T0399-1y7yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.35.1.3
1vjfA	6.3493e+01	1vjfA/T0399-1vjfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.116.1.1
1wnaA	6.4279e+01	1wnaA/T0399-1wnaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.319.1.1
1hkqA	7.1356e+01	1hkqA/T0399-1hkqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.10
2avtA	7.2669e+01	2avtA/T0399-2avtA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ijcA	7.5141e+01	2ijcA/T0399-2ijcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.152.1.3

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001