# List of top-scoring protein chains for t2k-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1jtgB	165	4.47e-05	d.98.1.1	67267
2g2uB	165	4.52e-05	d.98.1.1	134541
1mt6A	280	5.146	b.76.2.1,b.85.7.1	79446,79447
2o8xA	70	5.411		
1r69	69	12.76		
1cp3A	277	14.16	c.17.1.1	30992
2h27A	73	20.74	a.4.13.2	135993
1adrA	76	24.08	a.35.1.2	17042
1or7A	194	25.94	a.4.13.2,a.177.1.1	87332,87333
2cxyA	125	28.92		
2ef8A	84	29.76		
1utxA	66	34.55	a.35.1.3	108034
3bemA	218	39.26		
2d5vA	164	39.53		
1lj9A	144	42.28	a.4.5.28	78035
1ic8A	194	45.07	a.4.1.1,a.35.1.1	76740,76741
1vfrA	218	45.09	d.90.1.1	40247
2i5gA	325	45.73		
2nrrA	159	46.11		
1lnwA	147	46.41	a.4.5.28	78104
2b5aA	77	46.93	a.35.1.3	127882
1y7yA	74	48.33	a.35.1.3	122729
1ufmA	84	48.39	a.4.5.47	107816
1tygB	87	48.77	d.15.3.2	107455
2g17A	337	48.94	c.2.1.3,d.81.1.1	134512,134513
1yqgA	263	48.99		
2odvA	235	51.75		
2bnmA	198	52.95	a.35.1.3,b.82.1.10	128835,128836
1jkoC	52	55.88	a.4.1.2	66809
2aqjA	538	64.88		
1yuwA	554	67.03	b.130.1.1,c.55.1.1,c.55.1.1	124070,124071,124072
1vkiA	181	67.68	d.116.1.1	108664
3boqA	160	69.07		
2h0uA	217	70.18		
1fs1B	141	71.10	a.157.1.1,d.42.1.1	19252,38664
2fbhA	146	72.03	a.4.5.28	133245
2bf5A	98	74.22	d.137.1.1	128405
2h36X	112	78.41		
2ho3A	325	79.74		
2dvwB	83	79.76		
2fp8A	322	80.26		
1r69A	69	83.46	a.35.1.2	17028
1qtnA	164	84.57	c.17.1.1	30999
2amyA	246	85.36	c.108.1.10	127026
2o35A	105	87.03		
2rdpA	150	89.87