# List of top-scoring protein chains for t2k-w0.5-1-CB8-sep9-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1jtgB	165	0.000583	d.98.1.1	67267
2g2uB	165	0.000647	d.98.1.1	134541
2o8xA	70	9.834		
2ef8A	84	25.36		
6paxA	133	26.58	a.4.1.5,a.4.1.5	64758,64759
1jkoC	52	29.33	a.4.1.2	66809
2h27A	73	30.79	a.4.13.2	135993
1r69	69	34.79		
2cxyA	125	35.35		
1mt6A	280	36.14	b.76.2.1,b.85.7.1	79446,79447
1ic8A	194	38.29	a.4.1.1,a.35.1.1	76740,76741
1or7A	194	42.76	a.4.13.2,a.177.1.1	87332,87333
1v9jA	113	48.81	d.52.6.1	100542
2rdpA	150	49.89		
3bddA	142	53.68		
2a6mA	155	55.23	d.58.57.1	126287
2bnmA	198	56.17	a.35.1.3,b.82.1.10	128835,128836
3bjaA	139	56.96		
1hcrA	52	58.29	a.4.1.2	16020
1lj9A	144	58.87	a.4.5.28	78035
1lnwA	147	61.99	a.4.5.28	78104
3boqA	160	71.15		
1adrA	76	71.98	a.35.1.2	17042
2nnnA	140	74.34		
2fbiA	142	74.71	a.4.5.28	133246
3bj6A	152	76.90		
2fbhA	146	79.06	a.4.5.28	133245
2f5gA	133	82.77	d.58.57.1	132991
2agmA	167	83.05		
2bv6A	142	85.23		
2nyxA	168	87.42