Best Alignments for T0399

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2g2uB	2.7634e-10	2g2uB/T0399-2g2uB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.98.1.1
1jtgB	3.0665e-10	1jtgB/T0399-1jtgB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.98.1.1
2o8xA	2.0911e+01	2o8xA/T0399-2o8xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2h36X	2.2736e+01	2h36X/T0399-2h36X-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2h27A	2.9135e+01	2h27A/T0399-2h27A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.13.2
2fbhA	4.4796e+01	2fbhA/T0399-2fbhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.28
2oxgB	5.2844e+01	2oxgB/T0399-2oxgB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vd6A	6.4217e+01	1vd6A/T0399-1vd6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.18.3
1fgjA	6.8350e+01	1fgjA/T0399-1fgjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wdcB	6.8894e+01	1wdcB/T0399-1wdcB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.39.1.5
2grjA	7.2083e+01	2grjA/T0399-2grjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3b71D	7.7325e+01	3b71D/T0399-3b71D-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qdrA	7.8286e+01	2qdrA/T0399-2qdrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pliA	8.0123e+01	2pliA/T0399-2pliA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2a0mA	8.1482e+01	2a0mA/T0399-2a0mA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.42.1.1
1t6sA	8.4438e+01	1t6sA/T0399-1t6sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.60 a.4.5.60
1u6eA	8.5731e+01	1u6eA/T0399-1u6eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.95.1.2 c.95.1.2
1wdvA	8.7255e+01	1wdvA/T0399-1wdvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.116.1.1
2iskA	8.7555e+01	2iskA/T0399-2iskA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bemA	8.9590e+01	3bemA/T0399-3bemA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001