# List of top-scoring protein chains for T0399.t2k-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1xxmC	165	0.1346		
1s0wC	165	0.1376	d.98.1.1	98311
2g2uB	165	0.1444	d.98.1.1	134541
2pxgA	118	4.284		
2h36X	112	13.27		
2iorA	235	36.05		
1y4uA	559	44.97		
2ioqA	624	61.38		
1jkeA	145	66.24	c.110.1.1	66791
2qonA	373	68.04		
2qooA	373	68.21		
1hdmB	193	71.19	b.1.1.2,d.19.1.1	21584,38158
2qocA	344	72.05		
2qoiA	373	73.20		
2qofA	373	73.21		
2qobA	344	73.36		
2qo9A	373	73.37		
2qodA	373	73.41		
2qo7A	373	74.70		
2qokA	373	76.20		
1x2lA	101	82.53	a.35.1.7	121644
2f22A	144	83.50	a.213.1.2	132795
2qolA	373	86.41