# List of top-scoring protein chains for t2k-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1jtgB	165	3.10e-05	d.98.1.1	67267
2g2uB	165	3.16e-05	d.98.1.1	134541
2fyxA	143	1.367	d.58.57.1	134411
2fbhA	146	3.627	a.4.5.28	133245
1mt6A	280	3.894	b.76.2.1,b.85.7.1	79446,79447
2a6mA	155	5.250	d.58.57.1	126287
1vmbA	140	6.192	d.58.14.1	113672
2o8xA	70	7.644		
2f5gA	133	8.238	d.58.57.1	132991
3boqA	160	11.75		
2h36X	112	13.81		
2hr3A	147	13.85	a.4.5.28	136678
1tygB	87	17.44	d.15.3.2	107455
1r69	69	22.54		
2rdpA	150	27.03		
2vjvA	159	27.18		
2h27A	73	31.26	a.4.13.2	135993
2pexA	153	32.90		
1mqoA	227	32.98	d.157.1.1	103846
1lnwA	147	33.86	a.4.5.28	78104
1adrA	76	34.67	a.35.1.2	17042
2ef8A	84	37.13		
2q88A	257	37.60		
2nrrA	159	38.07		
3bddA	142	39.10		
2fa5A	162	39.51		
2ismA	352	40.74		
2bv6A	142	41.69		
2hpaA	342	41.98	c.60.1.2	33985
1lj9A	144	42.30	a.4.5.28	78035
3bjaA	139	42.46		
2bnmA	198	47.20	a.35.1.3,b.82.1.10	128835,128836
2ppxA	99	47.36		
1vfrA	218	48.98	d.90.1.1	40247
2gxgA	146	49.79		
2gauA	232	50.70	a.4.5.4,b.82.3.2	134894,134895
3bemA	218	50.95		
1th8A	145	53.88	d.122.1.3	106908
2e01A	457	55.14		
2iwxA	214	57.06	d.122.1.1	137758
2nnnA	140	57.59		
1vk1A	242	57.80	d.268.1.2	108634
2jspA	87	57.98		
1utxA	66	58.27	a.35.1.3	108034
1yqgA	263	60.48		
2i5gA	325	60.78		
2frhA	127	63.46	a.4.5.28	133988
1qtnA	164	63.67	c.17.1.1	30999
1rkbA	173	63.95	c.37.1.1	111854
2qkbA	154	65.41		
1vkiA	181	68.33	d.116.1.1	108664
3broA	141	69.11		
2ejhA	255	71.19		
2jmkA	111	71.54		
2fa1A	160	71.78	d.190.1.2	133182
2fbiA	142	71.79	a.4.5.28	133246
2b5aA	77	72.15	a.35.1.3	127882
1jkoC	52	73.09	a.4.1.2	66809
1s1hM	132	73.95	i.1.1.1	105165
1ufmA	84	78.24	a.4.5.47	107816
1lmb3	92	83.02		
2qwwA	154	84.05		
1r69A	69	84.61	a.35.1.2	17028
2nyxA	168	85.95		
1fs1B	141	86.01	a.157.1.1,d.42.1.1	19252,38664
2izzA	322	87.15		
2cxyA	125	87.20